Gene : Glyma.15G101900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33514:SF3 - PROTEIN ABCI12, CHLOROPLASTIC Genomic Order:  1019
Name:  ? Glyma.15G101900 Secondary Identifier:  ? PAC:30495960
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G101900 0.5kb upstream 0.5kb upstream 6385 true Chr15: 7958404-7964788 Glycine max
Glyma.15G101900 0.5kb upstream 0.5kb upstream 500 false Chr15: 7964289-7964788 Glycine max
Glyma.15G101900 0.5kb downstream 0.5kb downstream 6385 true Chr15: 7957904-7964288 Glycine max
Glyma.15G101900 0.5kb downstream 0.5kb downstream 500 false Chr15: 7957904-7958403 Glycine max
Glyma.15G101900 1.0kb upstream 1.0kb upstream 6885 true Chr15: 7958404-7965288 Glycine max
Glyma.15G101900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 7964289-7965288 Glycine max
Glyma.15G101900 1.0kb downstream 1.0kb downstream 6885 true Chr15: 7957404-7964288 Glycine max
Glyma.15G101900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 7957404-7958403 Glycine max
Glyma.15G101900 2.0kb upstream 2.0kb upstream 7885 true Chr15: 7958404-7966288 Glycine max
Glyma.15G101900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 7964289-7966288 Glycine max
Glyma.15G101900 2.0kb downstream 2.0kb downstream 7885 true Chr15: 7956404-7964288 Glycine max
Glyma.15G101900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 7956404-7958403 Glycine max
Glyma.15G101900 5.0kb upstream 5.0kb upstream 10885 true Chr15: 7958404-7969288 Glycine max
Glyma.15G101900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 7964289-7969288 Glycine max
Glyma.15G101900 5.0kb downstream 5.0kb downstream 10885 true Chr15: 7953404-7964288 Glycine max
Glyma.15G101900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 7953404-7958403 Glycine max
Glyma.15G101900 10.0kb upstream 10.0kb upstream 15885 true Chr15: 7958404-7974288 Glycine max
Glyma.15G101900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 7964289-7974288 Glycine max
Glyma.15G101900 10.0kb downstream 10.0kb downstream 15885 true Chr15: 7948404-7964288 Glycine max
Glyma.15G101900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 7948404-7958403 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026580 5273 Angiosperm View MSA
122307248 5265 Fabidae View MSA
124068339 5270 Rosid View MSA
123746391 5271 Pentapetalae View MSA
122787556 5272 Eudicot View MSA
121347292 5274 Embryophyte View MSA
123426199 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0731 0.0 71.8916   High
cufflinks 9.30815 0.0 48.2507    
cufflinks 8.66014 0.0 45.128    
cufflinks 10.7301 0.0 52.6347    
cufflinks 6.93779 0.0 38.7465    
cufflinks 4.80203 0.0 29.8905   Low
cufflinks 7.89173 0.0 33.7522    
cufflinks 9.47108 0.0 47.6315    
cufflinks 6.05989 0.0 33.5309    
cufflinks 0.369        
cufflinks 0.107       Low
cufflinks 0.42        
cufflinks 0.252        
cufflinks 0.279        
cufflinks 0.138       Low
cufflinks 0.568        
cufflinks 0.129       Low
cufflinks 0.478        
cufflinks 0.495        
cufflinks 0.777       High
cufflinks 0.128       Low
cufflinks 0.695       High
cufflinks 0.59        
cufflinks 0.158        
cufflinks 0.679       High
cufflinks 0.112       Low

0 Strain