Gene : Glyma.15G143800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR34804:SF1 - CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN Genomic Order:  1438
Name:  ? Glyma.15G143800 Secondary Identifier:  ? PAC:30495973
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G143800 0.5kb upstream 0.5kb upstream 2992 true Chr15: 11823686-11826677 Glycine max
Glyma.15G143800 0.5kb upstream 0.5kb upstream 500 false Chr15: 11823686-11824185 Glycine max
Glyma.15G143800 0.5kb downstream 0.5kb downstream 2992 true Chr15: 11824186-11827177 Glycine max
Glyma.15G143800 0.5kb downstream 0.5kb downstream 500 false Chr15: 11826678-11827177 Glycine max
Glyma.15G143800 1.0kb upstream 1.0kb upstream 3492 true Chr15: 11823186-11826677 Glycine max
Glyma.15G143800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11823186-11824185 Glycine max
Glyma.15G143800 1.0kb downstream 1.0kb downstream 3492 true Chr15: 11824186-11827677 Glycine max
Glyma.15G143800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11826678-11827677 Glycine max
Glyma.15G143800 2.0kb upstream 2.0kb upstream 4492 true Chr15: 11822186-11826677 Glycine max
Glyma.15G143800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11822186-11824185 Glycine max
Glyma.15G143800 2.0kb downstream 2.0kb downstream 4492 true Chr15: 11824186-11828677 Glycine max
Glyma.15G143800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11826678-11828677 Glycine max
Glyma.15G143800 5.0kb upstream 5.0kb upstream 7492 true Chr15: 11819186-11826677 Glycine max
Glyma.15G143800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11819186-11824185 Glycine max
Glyma.15G143800 5.0kb downstream 5.0kb downstream 7492 true Chr15: 11824186-11831677 Glycine max
Glyma.15G143800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11826678-11831677 Glycine max
Glyma.15G143800 10.0kb upstream 10.0kb upstream 12492 true Chr15: 11814186-11826677 Glycine max
Glyma.15G143800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11814186-11824185 Glycine max
Glyma.15G143800 10.0kb downstream 10.0kb downstream 12492 true Chr15: 11824186-11836677 Glycine max
Glyma.15G143800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11826678-11836677 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309377 5265 Fabidae View MSA
124060714 5270 Rosid View MSA
123751863 5271 Pentapetalae View MSA
122795534 5272 Eudicot View MSA
122049518 5273 Angiosperm View MSA
121345804 5274 Embryophyte View MSA
123427885 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9128 0.0 70.891 High  
cufflinks 7.51446 0.0 26.5437    
cufflinks 17.7443 0.0 56.2851    
cufflinks 44.695 0.0 125.717 High High
cufflinks 3.45476 0.0 12.7397    
cufflinks 32.6135 0.0 95.7882 High  
cufflinks 0.813972 0.0 3.20329   Low
cufflinks 16.5808 0.0 53.1299    
cufflinks 6.5156 0.0 23.1634    
cufflinks 2.61        
cufflinks 1.701        
cufflinks 2.764        
cufflinks 1.976        
cufflinks 0.027     Low Low
cufflinks 0.397       Low
cufflinks 2.31        
cufflinks 0.782        
cufflinks 5.37        
cufflinks 2.308        
cufflinks 3.1        
cufflinks 2.161        
cufflinks 3.353        
cufflinks 2.952        
cufflinks 2.487        
cufflinks 2.448        
cufflinks 1.47        

0 Strain