Gene : Glyma.15G146600 G. max Wm82.a2.v1
Defline:  (1 of 39) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  1466
Name:  ? Glyma.15G146600 Secondary Identifier:  ? PAC:30496765
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G146600 0.5kb upstream 0.5kb upstream 1557 true Chr15: 12055979-12057535 Glycine max
Glyma.15G146600 0.5kb upstream 0.5kb upstream 500 false Chr15: 12055979-12056478 Glycine max
Glyma.15G146600 0.5kb downstream 0.5kb downstream 1557 true Chr15: 12056479-12058035 Glycine max
Glyma.15G146600 0.5kb downstream 0.5kb downstream 500 false Chr15: 12057536-12058035 Glycine max
Glyma.15G146600 1.0kb upstream 1.0kb upstream 2057 true Chr15: 12055479-12057535 Glycine max
Glyma.15G146600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 12055479-12056478 Glycine max
Glyma.15G146600 1.0kb downstream 1.0kb downstream 2057 true Chr15: 12056479-12058535 Glycine max
Glyma.15G146600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 12057536-12058535 Glycine max
Glyma.15G146600 2.0kb upstream 2.0kb upstream 3057 true Chr15: 12054479-12057535 Glycine max
Glyma.15G146600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 12054479-12056478 Glycine max
Glyma.15G146600 2.0kb downstream 2.0kb downstream 3057 true Chr15: 12056479-12059535 Glycine max
Glyma.15G146600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 12057536-12059535 Glycine max
Glyma.15G146600 5.0kb upstream 5.0kb upstream 6057 true Chr15: 12051479-12057535 Glycine max
Glyma.15G146600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 12051479-12056478 Glycine max
Glyma.15G146600 5.0kb downstream 5.0kb downstream 6057 true Chr15: 12056479-12062535 Glycine max
Glyma.15G146600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 12057536-12062535 Glycine max
Glyma.15G146600 10.0kb upstream 10.0kb upstream 11057 true Chr15: 12046479-12057535 Glycine max
Glyma.15G146600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 12046479-12056478 Glycine max
Glyma.15G146600 10.0kb downstream 10.0kb downstream 11057 true Chr15: 12056479-12067535 Glycine max
Glyma.15G146600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 12057536-12067535 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312646 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.74592 0.0 28.4554    
cufflinks 1.41645 0.0 5.13354   Low
cufflinks 11.8976 0.0 33.6136    
cufflinks 5.65244 0.0 17.7132    
cufflinks 13.0288 0.0 36.8078    
cufflinks 104.164 0.0 294.59 High High
cufflinks 3.3869 0.0 11.4253    
cufflinks 12.96 0.0 36.442    
cufflinks 13.2729 0.0 37.2876    
cufflinks 2.866        
cufflinks 85.775     High High
cufflinks 5.8        
cufflinks 18.849     High  
cufflinks 3.512        
cufflinks 18.697     High  
cufflinks 0.144       Low
cufflinks 103.452     High High
cufflinks 1.81        
cufflinks 1.29        
cufflinks 0.053     Low Low
cufflinks 88.542     High High
cufflinks 0.092     Low Low
cufflinks 0.15       Low
cufflinks 279.816     High High
cufflinks 0.137       Low
cufflinks 146.832     High High

0 Strain