Gene : Glyma.15G149300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR19923 - WD40 REPEAT PROTEINPRL1/PRL2-RELATED Genomic Order:  1493
Name:  ? Glyma.15G149300 Secondary Identifier:  ? PAC:30499646
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G149300 0.5kb upstream 0.5kb upstream 7672 true Chr15: 12318480-12326151 Glycine max
Glyma.15G149300 0.5kb upstream 0.5kb upstream 500 false Chr15: 12318480-12318979 Glycine max
Glyma.15G149300 0.5kb downstream 0.5kb downstream 7672 true Chr15: 12318980-12326651 Glycine max
Glyma.15G149300 0.5kb downstream 0.5kb downstream 500 false Chr15: 12326152-12326651 Glycine max
Glyma.15G149300 1.0kb upstream 1.0kb upstream 8172 true Chr15: 12317980-12326151 Glycine max
Glyma.15G149300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 12317980-12318979 Glycine max
Glyma.15G149300 1.0kb downstream 1.0kb downstream 8172 true Chr15: 12318980-12327151 Glycine max
Glyma.15G149300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 12326152-12327151 Glycine max
Glyma.15G149300 2.0kb upstream 2.0kb upstream 9172 true Chr15: 12316980-12326151 Glycine max
Glyma.15G149300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 12316980-12318979 Glycine max
Glyma.15G149300 2.0kb downstream 2.0kb downstream 9172 true Chr15: 12318980-12328151 Glycine max
Glyma.15G149300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 12326152-12328151 Glycine max
Glyma.15G149300 5.0kb upstream 5.0kb upstream 12172 true Chr15: 12313980-12326151 Glycine max
Glyma.15G149300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 12313980-12318979 Glycine max
Glyma.15G149300 5.0kb downstream 5.0kb downstream 12172 true Chr15: 12318980-12331151 Glycine max
Glyma.15G149300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 12326152-12331151 Glycine max
Glyma.15G149300 10.0kb upstream 10.0kb upstream 17172 true Chr15: 12308980-12326151 Glycine max
Glyma.15G149300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 12308980-12318979 Glycine max
Glyma.15G149300 10.0kb downstream 10.0kb downstream 17172 true Chr15: 12318980-12336151 Glycine max
Glyma.15G149300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 12326152-12336151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305740 5265 Fabidae View MSA
124068732 5270 Rosid View MSA
123753307 5271 Pentapetalae View MSA
122797815 5272 Eudicot View MSA
122050667 5273 Angiosperm View MSA
121343955 5274 Embryophyte View MSA
123424287 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9168 0.0 37.1946    
cufflinks 14.4594 0.0 38.6232    
cufflinks 12.6644 0.0 33.907   Low
cufflinks 15.1905 0.0 40.5443    
cufflinks 16.7143 0.0 44.5918    
cufflinks 12.2698 0.0 32.8915   Low
cufflinks 19.1691 0.0 51.1899   High
cufflinks 14.8793 0.0 39.7201    
cufflinks 15.0323 0.0 40.1257    
cufflinks 3.667        
cufflinks 2.067       Low
cufflinks 3.284        
cufflinks 4.431        
cufflinks 5.57       High
cufflinks 2.491       Low
cufflinks 4.012        
cufflinks 2.926        
cufflinks 3.432        
cufflinks 3.997        
cufflinks 4.494       High
cufflinks 2.428       Low
cufflinks 4.2        
cufflinks 3.169        
cufflinks 2.407       Low
cufflinks 4.128        
cufflinks 2.596        

0 Strain