Gene : Glyma.15G137900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21011//PTHR21011:SF4 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 Genomic Order:  1379
Name:  ? Glyma.15G137900 Secondary Identifier:  ? PAC:30498215
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G137900 0.5kb upstream 0.5kb upstream 3731 true Chr15: 11221838-11225568 Glycine max
Glyma.15G137900 0.5kb upstream 0.5kb upstream 500 false Chr15: 11221838-11222337 Glycine max
Glyma.15G137900 0.5kb downstream 0.5kb downstream 3731 true Chr15: 11222338-11226068 Glycine max
Glyma.15G137900 0.5kb downstream 0.5kb downstream 500 false Chr15: 11225569-11226068 Glycine max
Glyma.15G137900 1.0kb upstream 1.0kb upstream 4231 true Chr15: 11221338-11225568 Glycine max
Glyma.15G137900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11221338-11222337 Glycine max
Glyma.15G137900 1.0kb downstream 1.0kb downstream 4231 true Chr15: 11222338-11226568 Glycine max
Glyma.15G137900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11225569-11226568 Glycine max
Glyma.15G137900 2.0kb upstream 2.0kb upstream 5231 true Chr15: 11220338-11225568 Glycine max
Glyma.15G137900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11220338-11222337 Glycine max
Glyma.15G137900 2.0kb downstream 2.0kb downstream 5231 true Chr15: 11222338-11227568 Glycine max
Glyma.15G137900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11225569-11227568 Glycine max
Glyma.15G137900 5.0kb upstream 5.0kb upstream 8231 true Chr15: 11217338-11225568 Glycine max
Glyma.15G137900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11217338-11222337 Glycine max
Glyma.15G137900 5.0kb downstream 5.0kb downstream 8231 true Chr15: 11222338-11230568 Glycine max
Glyma.15G137900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11225569-11230568 Glycine max
Glyma.15G137900 10.0kb upstream 10.0kb upstream 13231 true Chr15: 11212338-11225568 Glycine max
Glyma.15G137900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11212338-11222337 Glycine max
Glyma.15G137900 10.0kb downstream 10.0kb downstream 13231 true Chr15: 11222338-11235568 Glycine max
Glyma.15G137900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11225569-11235568 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299955 5265 Fabidae View MSA
124066561 5270 Rosid View MSA
123738958 5271 Pentapetalae View MSA
122791787 5272 Eudicot View MSA
122045597 5273 Angiosperm View MSA
121347704 5274 Embryophyte View MSA
123380604 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5131 0.0 60.1244 High High
cufflinks 16.7395 0.0 45.0968   High
cufflinks 5.98231 0.0 17.7056    
cufflinks 7.53373 0.0 21.6741    
cufflinks 5.74399 0.0 17.1806    
cufflinks 5.36413 0.0 16.1967    
cufflinks 10.6567 0.0 29.6519    
cufflinks 7.97136 0.0 22.8005    
cufflinks 4.90043 0.0 14.9676   Low
cufflinks 1.978        
cufflinks 0.318       Low
cufflinks 3.376        
cufflinks 1.378        
cufflinks 1.164        
cufflinks 0.47       Low
cufflinks 7.275     High High
cufflinks 0.623        
cufflinks 3.395        
cufflinks 4.877        
cufflinks 6.002        
cufflinks 0.466       Low
cufflinks 6.694       High
cufflinks 8.681     High High
cufflinks 0.508       Low
cufflinks 6.91       High
cufflinks 0.459       Low

0 Strain