Gene : Glyma.15G176900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 Genomic Order:  1769
Name:  ? Glyma.15G176900 Secondary Identifier:  ? PAC:30495681
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G176900 0.5kb upstream 0.5kb upstream 1736 true Chr15: 16798048-16799783 Glycine max
Glyma.15G176900 0.5kb upstream 0.5kb upstream 500 false Chr15: 16798048-16798547 Glycine max
Glyma.15G176900 0.5kb downstream 0.5kb downstream 1736 true Chr15: 16798548-16800283 Glycine max
Glyma.15G176900 0.5kb downstream 0.5kb downstream 500 false Chr15: 16799784-16800283 Glycine max
Glyma.15G176900 1.0kb upstream 1.0kb upstream 2236 true Chr15: 16797548-16799783 Glycine max
Glyma.15G176900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 16797548-16798547 Glycine max
Glyma.15G176900 1.0kb downstream 1.0kb downstream 2236 true Chr15: 16798548-16800783 Glycine max
Glyma.15G176900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 16799784-16800783 Glycine max
Glyma.15G176900 2.0kb upstream 2.0kb upstream 3236 true Chr15: 16796548-16799783 Glycine max
Glyma.15G176900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 16796548-16798547 Glycine max
Glyma.15G176900 2.0kb downstream 2.0kb downstream 3236 true Chr15: 16798548-16801783 Glycine max
Glyma.15G176900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 16799784-16801783 Glycine max
Glyma.15G176900 5.0kb upstream 5.0kb upstream 6236 true Chr15: 16793548-16799783 Glycine max
Glyma.15G176900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 16793548-16798547 Glycine max
Glyma.15G176900 5.0kb downstream 5.0kb downstream 6236 true Chr15: 16798548-16804783 Glycine max
Glyma.15G176900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 16799784-16804783 Glycine max
Glyma.15G176900 10.0kb upstream 10.0kb upstream 11236 true Chr15: 16788548-16799783 Glycine max
Glyma.15G176900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 16788548-16798547 Glycine max
Glyma.15G176900 10.0kb downstream 10.0kb downstream 11236 true Chr15: 16798548-16809783 Glycine max
Glyma.15G176900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 16799784-16809783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314222 5265 Fabidae View MSA
124066370 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 102.006 0.0 295.895 High High
cufflinks 84.9649 0.0 240.996 High  
cufflinks 60.743 0.0 166.526 High  
cufflinks 10.6452 0.0 29.9234    
cufflinks 0.874422 0.0 3.21773   Low
cufflinks 5.57216 0.0 16.9627    
cufflinks 90.3962 0.0 258.719 High  
cufflinks 12.9602 0.0 35.7297    
cufflinks 1.73718 0.0 6.10539   Low
cufflinks 28.435     High  
cufflinks 0.08        
cufflinks 39.761     High  
cufflinks 0.065     Low Low
cufflinks 0.01     Low Low
cufflinks 0.587        
cufflinks 281.7     High High
cufflinks 0.117        
cufflinks 87.093     High  
cufflinks 33.46     High  
cufflinks 504.031     High High
cufflinks 0.051     Low Low
cufflinks 427.856     High High
cufflinks 559.465     High High
cufflinks 0.093        
cufflinks 307.619     High High
cufflinks 0.144        

0 Strain