Gene : Glyma.15G180900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10772:SF0 - 20 KDA CHAPERONIN, CHLOROPLASTIC Genomic Order:  1809
Name:  ? Glyma.15G180900 Secondary Identifier:  ? PAC:30497030
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G180900 0.5kb upstream 0.5kb upstream 4104 true Chr15: 17449958-17454061 Glycine max
Glyma.15G180900 0.5kb upstream 0.5kb upstream 500 false Chr15: 17449958-17450457 Glycine max
Glyma.15G180900 0.5kb downstream 0.5kb downstream 4104 true Chr15: 17450458-17454561 Glycine max
Glyma.15G180900 0.5kb downstream 0.5kb downstream 500 false Chr15: 17454062-17454561 Glycine max
Glyma.15G180900 1.0kb upstream 1.0kb upstream 4604 true Chr15: 17449458-17454061 Glycine max
Glyma.15G180900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 17449458-17450457 Glycine max
Glyma.15G180900 1.0kb downstream 1.0kb downstream 4604 true Chr15: 17450458-17455061 Glycine max
Glyma.15G180900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 17454062-17455061 Glycine max
Glyma.15G180900 2.0kb upstream 2.0kb upstream 5604 true Chr15: 17448458-17454061 Glycine max
Glyma.15G180900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 17448458-17450457 Glycine max
Glyma.15G180900 2.0kb downstream 2.0kb downstream 5604 true Chr15: 17450458-17456061 Glycine max
Glyma.15G180900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 17454062-17456061 Glycine max
Glyma.15G180900 5.0kb upstream 5.0kb upstream 8604 true Chr15: 17445458-17454061 Glycine max
Glyma.15G180900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 17445458-17450457 Glycine max
Glyma.15G180900 5.0kb downstream 5.0kb downstream 8604 true Chr15: 17450458-17459061 Glycine max
Glyma.15G180900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 17454062-17459061 Glycine max
Glyma.15G180900 10.0kb upstream 10.0kb upstream 13604 true Chr15: 17440458-17454061 Glycine max
Glyma.15G180900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 17440458-17450457 Glycine max
Glyma.15G180900 10.0kb downstream 10.0kb downstream 13604 true Chr15: 17450458-17464061 Glycine max
Glyma.15G180900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 17454062-17464061 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299713 5265 Fabidae View MSA
124064772 5270 Rosid View MSA
123741725 5271 Pentapetalae View MSA
122790070 5272 Eudicot View MSA
122045141 5273 Angiosperm View MSA
121344791 5274 Embryophyte View MSA
123424643 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.3544 0.0 234.49 High High
cufflinks 59.5339 0.0 165.581 High  
cufflinks 16.8146 0.0 45.2013   Low
cufflinks 41.8594 0.0 113.326 High  
cufflinks 51.8985 0.0 142.675 High  
cufflinks 44.2699 0.0 120.235 High  
cufflinks 62.9885 0.0 176.266 High  
cufflinks 39.851 0.0 107.687 High  
cufflinks 52.0908 0.0 143.263 High  
cufflinks 13.35     High  
cufflinks 5.161       Low
cufflinks 14.05     High  
cufflinks 17.46     High  
cufflinks 22.345     High  
cufflinks 6.397     High  
cufflinks 51.917     High High
cufflinks 6.256     High  
cufflinks 13.011     High  
cufflinks 17.306     High  
cufflinks 39.921     High High
cufflinks 4.149       Low
cufflinks 38.684     High High
cufflinks 45.516     High High
cufflinks 3.18       Low
cufflinks 49.624     High High
cufflinks 5.385       Low

0 Strain