Gene : Glyma.15G181400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00059 - Lectin C-type domain (Lectin_C) Genomic Order:  1814
Name:  ? Glyma.15G181400 Secondary Identifier:  ? PAC:30496212
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G181400 0.5kb upstream 0.5kb upstream 6175 true Chr15: 17559877-17566051 Glycine max
Glyma.15G181400 0.5kb upstream 0.5kb upstream 500 false Chr15: 17565552-17566051 Glycine max
Glyma.15G181400 0.5kb downstream 0.5kb downstream 6175 true Chr15: 17559377-17565551 Glycine max
Glyma.15G181400 0.5kb downstream 0.5kb downstream 500 false Chr15: 17559377-17559876 Glycine max
Glyma.15G181400 1.0kb upstream 1.0kb upstream 6675 true Chr15: 17559877-17566551 Glycine max
Glyma.15G181400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 17565552-17566551 Glycine max
Glyma.15G181400 1.0kb downstream 1.0kb downstream 6675 true Chr15: 17558877-17565551 Glycine max
Glyma.15G181400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 17558877-17559876 Glycine max
Glyma.15G181400 2.0kb upstream 2.0kb upstream 7675 true Chr15: 17559877-17567551 Glycine max
Glyma.15G181400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 17565552-17567551 Glycine max
Glyma.15G181400 2.0kb downstream 2.0kb downstream 7675 true Chr15: 17557877-17565551 Glycine max
Glyma.15G181400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 17557877-17559876 Glycine max
Glyma.15G181400 5.0kb upstream 5.0kb upstream 10675 true Chr15: 17559877-17570551 Glycine max
Glyma.15G181400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 17565552-17570551 Glycine max
Glyma.15G181400 5.0kb downstream 5.0kb downstream 10675 true Chr15: 17554877-17565551 Glycine max
Glyma.15G181400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 17554877-17559876 Glycine max
Glyma.15G181400 10.0kb upstream 10.0kb upstream 15675 true Chr15: 17559877-17575551 Glycine max
Glyma.15G181400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 17565552-17575551 Glycine max
Glyma.15G181400 10.0kb downstream 10.0kb downstream 15675 true Chr15: 17549877-17565551 Glycine max
Glyma.15G181400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 17549877-17559876 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308117 5265 Fabidae View MSA
124063336 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.30769 0.0 23.1459    
cufflinks 10.4147 0.0 31.5372   High
cufflinks 6.29254 0.0 20.3458    
cufflinks 7.05356 0.0 26.9129    
cufflinks 6.90909 0.0 28.1084    
cufflinks 7.27626 0.0 26.9466    
cufflinks 7.71515 0.0 24.1702    
cufflinks 8.58314 0.0 31.7154    
cufflinks 5.86764 0.0 19.226   Low
cufflinks 1.428        
cufflinks 1.091        
cufflinks 1.376        
cufflinks 1.354        
cufflinks 1.486        
cufflinks 1.451        
cufflinks 1.263        
cufflinks 0.837       Low
cufflinks 1.794       High
cufflinks 2.488       High
cufflinks 1.129        
cufflinks 1.716        
cufflinks 1.313        
cufflinks 1.926       High
cufflinks 1.409        
cufflinks 1.102        
cufflinks 1.228        

0 Strain