Gene : Glyma.15G169800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22850//PTHR22850:SF105 - WD40 REPEAT FAMILY Genomic Order:  1698
Name:  ? Glyma.15G169800 Secondary Identifier:  ? PAC:30495885
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G169800 0.5kb upstream 0.5kb upstream 8382 true Chr15: 15236453-15244834 Glycine max
Glyma.15G169800 0.5kb upstream 0.5kb upstream 500 false Chr15: 15244335-15244834 Glycine max
Glyma.15G169800 0.5kb downstream 0.5kb downstream 8382 true Chr15: 15235953-15244334 Glycine max
Glyma.15G169800 0.5kb downstream 0.5kb downstream 500 false Chr15: 15235953-15236452 Glycine max
Glyma.15G169800 1.0kb upstream 1.0kb upstream 8882 true Chr15: 15236453-15245334 Glycine max
Glyma.15G169800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 15244335-15245334 Glycine max
Glyma.15G169800 1.0kb downstream 1.0kb downstream 8882 true Chr15: 15235453-15244334 Glycine max
Glyma.15G169800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 15235453-15236452 Glycine max
Glyma.15G169800 2.0kb upstream 2.0kb upstream 9882 true Chr15: 15236453-15246334 Glycine max
Glyma.15G169800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 15244335-15246334 Glycine max
Glyma.15G169800 2.0kb downstream 2.0kb downstream 9882 true Chr15: 15234453-15244334 Glycine max
Glyma.15G169800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 15234453-15236452 Glycine max
Glyma.15G169800 5.0kb upstream 5.0kb upstream 12882 true Chr15: 15236453-15249334 Glycine max
Glyma.15G169800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 15244335-15249334 Glycine max
Glyma.15G169800 5.0kb downstream 5.0kb downstream 12882 true Chr15: 15231453-15244334 Glycine max
Glyma.15G169800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 15231453-15236452 Glycine max
Glyma.15G169800 10.0kb upstream 10.0kb upstream 17882 true Chr15: 15236453-15254334 Glycine max
Glyma.15G169800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 15244335-15254334 Glycine max
Glyma.15G169800 10.0kb downstream 10.0kb downstream 17882 true Chr15: 15226453-15244334 Glycine max
Glyma.15G169800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 15226453-15236452 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041058 5273 Angiosperm View MSA
122303424 5265 Fabidae View MSA
124070712 5270 Rosid View MSA
123743573 5271 Pentapetalae View MSA
122790330 5272 Eudicot View MSA
121347488 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.2671 0.0 60.2909 High  
cufflinks 51.167 0.0 150.719 High High
cufflinks 20.5915 0.0 55.5328 High  
cufflinks 23.9027 0.0 65.0094 High  
cufflinks 29.7362 0.0 82.2474 High  
cufflinks 16.0023 0.0 42.7788   Low
cufflinks 31.8981 0.0 88.7041 High  
cufflinks 21.8985 0.0 59.2507 High  
cufflinks 33.0236 0.0 92.1964 High  
cufflinks 6.507        
cufflinks 2.925       Low
cufflinks 9.407     High  
cufflinks 8.206     High  
cufflinks 10.341     High  
cufflinks 7.78     High  
cufflinks 10.459     High  
cufflinks 5.505        
cufflinks 9.503     High  
cufflinks 15.869     High High
cufflinks 10.777     High  
cufflinks 3.662       Low
cufflinks 11.487     High  
cufflinks 11.322     High  
cufflinks 3.222       Low
cufflinks 10.03     High  
cufflinks 5.128        

0 Strain