Gene : Glyma.15G166700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10459:SF72 - DNA LIGASE 4 Genomic Order:  1667
Name:  ? Glyma.15G166700 Secondary Identifier:  ? PAC:30499014
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G166700 0.5kb upstream 0.5kb upstream 20317 true Chr15: 14522868-14543184 Glycine max
Glyma.15G166700 0.5kb upstream 0.5kb upstream 500 false Chr15: 14522868-14523367 Glycine max
Glyma.15G166700 0.5kb downstream 0.5kb downstream 20317 true Chr15: 14523368-14543684 Glycine max
Glyma.15G166700 0.5kb downstream 0.5kb downstream 500 false Chr15: 14543185-14543684 Glycine max
Glyma.15G166700 1.0kb upstream 1.0kb upstream 20817 true Chr15: 14522368-14543184 Glycine max
Glyma.15G166700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 14522368-14523367 Glycine max
Glyma.15G166700 1.0kb downstream 1.0kb downstream 20817 true Chr15: 14523368-14544184 Glycine max
Glyma.15G166700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 14543185-14544184 Glycine max
Glyma.15G166700 2.0kb upstream 2.0kb upstream 21817 true Chr15: 14521368-14543184 Glycine max
Glyma.15G166700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 14521368-14523367 Glycine max
Glyma.15G166700 2.0kb downstream 2.0kb downstream 21817 true Chr15: 14523368-14545184 Glycine max
Glyma.15G166700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 14543185-14545184 Glycine max
Glyma.15G166700 5.0kb upstream 5.0kb upstream 24817 true Chr15: 14518368-14543184 Glycine max
Glyma.15G166700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 14518368-14523367 Glycine max
Glyma.15G166700 5.0kb downstream 5.0kb downstream 24817 true Chr15: 14523368-14548184 Glycine max
Glyma.15G166700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 14543185-14548184 Glycine max
Glyma.15G166700 10.0kb upstream 10.0kb upstream 29817 true Chr15: 14513368-14543184 Glycine max
Glyma.15G166700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 14513368-14523367 Glycine max
Glyma.15G166700 10.0kb downstream 10.0kb downstream 29817 true Chr15: 14523368-14553184 Glycine max
Glyma.15G166700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 14543185-14553184 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307515 5265 Fabidae View MSA
124066259 5270 Rosid View MSA
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.20065 0.0 26.8361   High
cufflinks 6.26496 0.0 23.5772   High
cufflinks 5.83492 0.0 22.3066    
cufflinks 2.64062 0.0 11.5005   Low
cufflinks 3.56128 0.0 14.6814    
cufflinks 2.16069 0.0 9.15184   Low
cufflinks 4.11283 0.0 16.3097    
cufflinks 3.72048 0.0 14.9955    
cufflinks 4.53639 0.0 17.7304    
cufflinks 0.184       Low
cufflinks 0.231       Low
cufflinks 0.454        
cufflinks 0.273        
cufflinks 0.264        
cufflinks 0.489        
cufflinks 0.571        
cufflinks 0.187       Low
cufflinks 0.457        
cufflinks 0.586       High
cufflinks 0.454        
cufflinks 0.276        
cufflinks 0.761       High
cufflinks 0.629       High
cufflinks 0.303        
cufflinks 0.467        
cufflinks 0.371        

0 Strain