Gene : Glyma.15G202300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11071//PTHR11071:SF286 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  2023
Name:  ? Glyma.15G202300 Secondary Identifier:  ? PAC:30499564
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G202300 0.5kb upstream 0.5kb upstream 3928 true Chr15: 25413964-25417891 Glycine max
Glyma.15G202300 0.5kb upstream 0.5kb upstream 500 false Chr15: 25413964-25414463 Glycine max
Glyma.15G202300 0.5kb downstream 0.5kb downstream 3928 true Chr15: 25414464-25418391 Glycine max
Glyma.15G202300 0.5kb downstream 0.5kb downstream 500 false Chr15: 25417892-25418391 Glycine max
Glyma.15G202300 1.0kb upstream 1.0kb upstream 4428 true Chr15: 25413464-25417891 Glycine max
Glyma.15G202300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 25413464-25414463 Glycine max
Glyma.15G202300 1.0kb downstream 1.0kb downstream 4428 true Chr15: 25414464-25418891 Glycine max
Glyma.15G202300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 25417892-25418891 Glycine max
Glyma.15G202300 2.0kb upstream 2.0kb upstream 5428 true Chr15: 25412464-25417891 Glycine max
Glyma.15G202300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 25412464-25414463 Glycine max
Glyma.15G202300 2.0kb downstream 2.0kb downstream 5428 true Chr15: 25414464-25419891 Glycine max
Glyma.15G202300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 25417892-25419891 Glycine max
Glyma.15G202300 5.0kb upstream 5.0kb upstream 8428 true Chr15: 25409464-25417891 Glycine max
Glyma.15G202300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 25409464-25414463 Glycine max
Glyma.15G202300 5.0kb downstream 5.0kb downstream 8428 true Chr15: 25414464-25422891 Glycine max
Glyma.15G202300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 25417892-25422891 Glycine max
Glyma.15G202300 10.0kb upstream 10.0kb upstream 13428 true Chr15: 25404464-25417891 Glycine max
Glyma.15G202300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 25404464-25414463 Glycine max
Glyma.15G202300 10.0kb downstream 10.0kb downstream 13428 true Chr15: 25414464-25427891 Glycine max
Glyma.15G202300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 25417892-25427891 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309939 5265 Fabidae View MSA
124063352 5270 Rosid View MSA
123747072 5271 Pentapetalae View MSA
122789067 5272 Eudicot View MSA
122047541 5273 Angiosperm View MSA
121347780 5274 Embryophyte View MSA
123425536 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.932 0.0 31.0128   High
cufflinks 9.99319 0.0 28.771   High
cufflinks 3.2476 0.0 11.0056    
cufflinks 5.58646 0.0 17.4419    
cufflinks 1.72436 0.0 6.10249    
cufflinks 1.78445 0.0 6.31816    
cufflinks 2.63097 0.0 8.98877    
cufflinks 3.98229 0.0 13.0016    
cufflinks 1.36868 0.0 4.94091   Low
cufflinks 1.195        
cufflinks 0.156       Low
cufflinks 0.663        
cufflinks 0.112       Low
cufflinks 0.157       Low
cufflinks 0.173        
cufflinks 5.296       High
cufflinks 0.179        
cufflinks 0.622        
cufflinks 1.897        
cufflinks 5.005       High
cufflinks 0.19        
cufflinks 4.243       High
cufflinks 2.83        
cufflinks 0.328        
cufflinks 4.731       High
cufflinks 0.239        

0 Strain