Gene : Glyma.15G193000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19858 - WD40 REPEAT PROTEIN Genomic Order:  1930
Name:  ? Glyma.15G193000 Secondary Identifier:  ? PAC:30497666
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G193000 0.5kb upstream 0.5kb upstream 11442 true Chr15: 21115215-21126656 Glycine max
Glyma.15G193000 0.5kb upstream 0.5kb upstream 500 false Chr15: 21126157-21126656 Glycine max
Glyma.15G193000 0.5kb downstream 0.5kb downstream 11442 true Chr15: 21114715-21126156 Glycine max
Glyma.15G193000 0.5kb downstream 0.5kb downstream 500 false Chr15: 21114715-21115214 Glycine max
Glyma.15G193000 1.0kb upstream 1.0kb upstream 11942 true Chr15: 21115215-21127156 Glycine max
Glyma.15G193000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 21126157-21127156 Glycine max
Glyma.15G193000 1.0kb downstream 1.0kb downstream 11942 true Chr15: 21114215-21126156 Glycine max
Glyma.15G193000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 21114215-21115214 Glycine max
Glyma.15G193000 2.0kb upstream 2.0kb upstream 12942 true Chr15: 21115215-21128156 Glycine max
Glyma.15G193000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 21126157-21128156 Glycine max
Glyma.15G193000 2.0kb downstream 2.0kb downstream 12942 true Chr15: 21113215-21126156 Glycine max
Glyma.15G193000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 21113215-21115214 Glycine max
Glyma.15G193000 5.0kb upstream 5.0kb upstream 15942 true Chr15: 21115215-21131156 Glycine max
Glyma.15G193000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 21126157-21131156 Glycine max
Glyma.15G193000 5.0kb downstream 5.0kb downstream 15942 true Chr15: 21110215-21126156 Glycine max
Glyma.15G193000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 21110215-21115214 Glycine max
Glyma.15G193000 10.0kb upstream 10.0kb upstream 20942 true Chr15: 21115215-21136156 Glycine max
Glyma.15G193000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 21126157-21136156 Glycine max
Glyma.15G193000 10.0kb downstream 10.0kb downstream 20942 true Chr15: 21105215-21126156 Glycine max
Glyma.15G193000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 21105215-21115214 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301197 5265 Fabidae View MSA
124068186 5270 Rosid View MSA
123748655 5271 Pentapetalae View MSA
122789333 5272 Eudicot View MSA
122043279 5273 Angiosperm View MSA
121345886 5274 Embryophyte View MSA
123424187 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.113 0.0 29.6742   High
cufflinks 4.10506 0.0 11.3835    
cufflinks 2.38211 0.0 7.01793   Low
cufflinks 4.35462 0.0 12.0107    
cufflinks 7.50796 0.0 20.0963    
cufflinks 1.91053 0.0 5.78931   Low
cufflinks 6.42227 0.0 17.2914    
cufflinks 3.82275 0.0 10.6677    
cufflinks 4.12491 0.0 11.4223    
cufflinks 0.782        
cufflinks 0.375       Low
cufflinks 1.524        
cufflinks 2.898       High
cufflinks 4.36       High
cufflinks 0.673        
cufflinks 0.934        
cufflinks 0.867        
cufflinks 1.303        
cufflinks 2.061       High
cufflinks 0.572        
cufflinks 0.577        
cufflinks 0.744        
cufflinks 1.336        
cufflinks 0.415       Low
cufflinks 0.739        
cufflinks 0.961        

0 Strain