Gene : Glyma.15G196400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12210:SF71 - SCP1-LIKE SMALL PHOSPHATASE 4-RELATED Genomic Order:  1964
Name:  ? Glyma.15G196400 Secondary Identifier:  ? PAC:30497379
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G196400 0.5kb upstream 0.5kb upstream 17975 true Chr15: 22603839-22621813 Glycine max
Glyma.15G196400 0.5kb upstream 0.5kb upstream 500 false Chr15: 22621314-22621813 Glycine max
Glyma.15G196400 0.5kb downstream 0.5kb downstream 17975 true Chr15: 22603339-22621313 Glycine max
Glyma.15G196400 0.5kb downstream 0.5kb downstream 500 false Chr15: 22603339-22603838 Glycine max
Glyma.15G196400 1.0kb upstream 1.0kb upstream 18475 true Chr15: 22603839-22622313 Glycine max
Glyma.15G196400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 22621314-22622313 Glycine max
Glyma.15G196400 1.0kb downstream 1.0kb downstream 18475 true Chr15: 22602839-22621313 Glycine max
Glyma.15G196400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 22602839-22603838 Glycine max
Glyma.15G196400 2.0kb upstream 2.0kb upstream 19475 true Chr15: 22603839-22623313 Glycine max
Glyma.15G196400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 22621314-22623313 Glycine max
Glyma.15G196400 2.0kb downstream 2.0kb downstream 19475 true Chr15: 22601839-22621313 Glycine max
Glyma.15G196400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 22601839-22603838 Glycine max
Glyma.15G196400 5.0kb upstream 5.0kb upstream 22475 true Chr15: 22603839-22626313 Glycine max
Glyma.15G196400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 22621314-22626313 Glycine max
Glyma.15G196400 5.0kb downstream 5.0kb downstream 22475 true Chr15: 22598839-22621313 Glycine max
Glyma.15G196400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 22598839-22603838 Glycine max
Glyma.15G196400 10.0kb upstream 10.0kb upstream 27475 true Chr15: 22603839-22631313 Glycine max
Glyma.15G196400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 22621314-22631313 Glycine max
Glyma.15G196400 10.0kb downstream 10.0kb downstream 27475 true Chr15: 22593839-22621313 Glycine max
Glyma.15G196400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 22593839-22603838 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308135 5265 Fabidae View MSA
124073218 5270 Rosid View MSA
123748033 5271 Pentapetalae View MSA
122786576 5272 Eudicot View MSA
122048249 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121310904 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3676 0.0 56.7759   High
cufflinks 4.97967 0.0 28.096    
cufflinks 8.54291 0.0 43.8409   High
cufflinks 4.48506 0.0 22.5706    
cufflinks 3.9301 0.0 24.0854   Low
cufflinks 5.20431 0.0 29.8427    
cufflinks 4.2804 0.0 25.5271    
cufflinks 4.80617 0.0 22.2602    
cufflinks 6.45695 0.0 36.1364    
cufflinks 0.146        
cufflinks 0.176        
cufflinks 0.2        
cufflinks 0.107       Low
cufflinks 0.072     Low Low
cufflinks 0.317       High
cufflinks 0.223        
cufflinks 0.195        
cufflinks 0.223        
cufflinks 0.178        
cufflinks 0.219        
cufflinks 0.173        
cufflinks 0.239        
cufflinks 0.253        
cufflinks 0.18        
cufflinks 0.236        
cufflinks 0.208        

0 Strain