Gene : Glyma.15G196900 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR32227:SF127 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  1969
Name:  ? Glyma.15G196900 Secondary Identifier:  ? PAC:30499581
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G196900 0.5kb upstream 0.5kb upstream 3947 true Chr15: 22852840-22856786 Glycine max
Glyma.15G196900 0.5kb upstream 0.5kb upstream 500 false Chr15: 22856287-22856786 Glycine max
Glyma.15G196900 0.5kb downstream 0.5kb downstream 3947 true Chr15: 22852340-22856286 Glycine max
Glyma.15G196900 0.5kb downstream 0.5kb downstream 500 false Chr15: 22852340-22852839 Glycine max
Glyma.15G196900 1.0kb upstream 1.0kb upstream 4447 true Chr15: 22852840-22857286 Glycine max
Glyma.15G196900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 22856287-22857286 Glycine max
Glyma.15G196900 1.0kb downstream 1.0kb downstream 4447 true Chr15: 22851840-22856286 Glycine max
Glyma.15G196900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 22851840-22852839 Glycine max
Glyma.15G196900 2.0kb upstream 2.0kb upstream 5447 true Chr15: 22852840-22858286 Glycine max
Glyma.15G196900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 22856287-22858286 Glycine max
Glyma.15G196900 2.0kb downstream 2.0kb downstream 5447 true Chr15: 22850840-22856286 Glycine max
Glyma.15G196900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 22850840-22852839 Glycine max
Glyma.15G196900 5.0kb upstream 5.0kb upstream 8447 true Chr15: 22852840-22861286 Glycine max
Glyma.15G196900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 22856287-22861286 Glycine max
Glyma.15G196900 5.0kb downstream 5.0kb downstream 8447 true Chr15: 22847840-22856286 Glycine max
Glyma.15G196900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 22847840-22852839 Glycine max
Glyma.15G196900 10.0kb upstream 10.0kb upstream 13447 true Chr15: 22852840-22866286 Glycine max
Glyma.15G196900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 22856287-22866286 Glycine max
Glyma.15G196900 10.0kb downstream 10.0kb downstream 13447 true Chr15: 22842840-22856286 Glycine max
Glyma.15G196900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 22842840-22852839 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309743 5265 Fabidae View MSA
124069685 5270 Rosid View MSA
123748729 5271 Pentapetalae View MSA
122795839 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.195031 0.0 0.756568 Low Low
cufflinks 0.758716 0.0 2.75863    
cufflinks 0.320483 0.0 1.21544    
cufflinks 1.35698 0.0 4.71647    
cufflinks 0.924847 0.0 3.31748    
cufflinks 0.206454 0.0 0.79875 Low Low
cufflinks 1.63536 0.0 5.58279   High
cufflinks 1.28751 0.0 4.49068    
cufflinks 1.08903 0.0 3.86024    
cufflinks 0.954       High
cufflinks 0.214        
cufflinks 0.215        
cufflinks 0.719       High
cufflinks 0.183        
cufflinks 0.017     Low Low
cufflinks 0.371        
cufflinks 0.273        
cufflinks 0.408        
cufflinks 0.141        
cufflinks 0.329        
cufflinks 0.234        
cufflinks 0.372        
cufflinks 0.362        
cufflinks 0.11        
cufflinks 0.339        
cufflinks 0.279        

0 Strain