Gene : Glyma.15G197800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14363:SF16 - HEPARANASE-LIKE PROTEIN 3 Genomic Order:  1978
Name:  ? Glyma.15G197800 Secondary Identifier:  ? PAC:30499190
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7213 Glycine max pathologic  
Gmax PWY-7214 Glycine max pathologic  
Gmax PWY-7445 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G197800 0.5kb upstream 0.5kb upstream 5087 true Chr15: 23128232-23133318 Glycine max
Glyma.15G197800 0.5kb upstream 0.5kb upstream 500 false Chr15: 23132819-23133318 Glycine max
Glyma.15G197800 0.5kb downstream 0.5kb downstream 5087 true Chr15: 23127732-23132818 Glycine max
Glyma.15G197800 0.5kb downstream 0.5kb downstream 500 false Chr15: 23127732-23128231 Glycine max
Glyma.15G197800 1.0kb upstream 1.0kb upstream 5587 true Chr15: 23128232-23133818 Glycine max
Glyma.15G197800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 23132819-23133818 Glycine max
Glyma.15G197800 1.0kb downstream 1.0kb downstream 5587 true Chr15: 23127232-23132818 Glycine max
Glyma.15G197800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 23127232-23128231 Glycine max
Glyma.15G197800 2.0kb upstream 2.0kb upstream 6587 true Chr15: 23128232-23134818 Glycine max
Glyma.15G197800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 23132819-23134818 Glycine max
Glyma.15G197800 2.0kb downstream 2.0kb downstream 6587 true Chr15: 23126232-23132818 Glycine max
Glyma.15G197800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 23126232-23128231 Glycine max
Glyma.15G197800 5.0kb upstream 5.0kb upstream 9587 true Chr15: 23128232-23137818 Glycine max
Glyma.15G197800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 23132819-23137818 Glycine max
Glyma.15G197800 5.0kb downstream 5.0kb downstream 9587 true Chr15: 23123232-23132818 Glycine max
Glyma.15G197800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 23123232-23128231 Glycine max
Glyma.15G197800 10.0kb upstream 10.0kb upstream 14587 true Chr15: 23128232-23142818 Glycine max
Glyma.15G197800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 23132819-23142818 Glycine max
Glyma.15G197800 10.0kb downstream 10.0kb downstream 14587 true Chr15: 23118232-23132818 Glycine max
Glyma.15G197800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 23118232-23128231 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310880 5265 Fabidae View MSA
124063624 5270 Rosid View MSA
123745490 5271 Pentapetalae View MSA
122791250 5272 Eudicot View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.35326 0.0 7.3712   Low
cufflinks 24.389 0.0 65.9248 High  
cufflinks 5.51319 0.0 15.3855    
cufflinks 31.2041 0.0 85.8926 High High
cufflinks 9.51814 0.0 25.6672    
cufflinks 4.99556 0.0 14.1446    
cufflinks 26.1859 0.0 71.0078 High High
cufflinks 14.4921 0.0 38.6631    
cufflinks 8.54566 0.0 23.1468    
cufflinks 11.661     High High
cufflinks 0.465       Low
cufflinks 4.598        
cufflinks 5.092        
cufflinks 8.036     High  
cufflinks 0.572       Low
cufflinks 8.427     High  
cufflinks 1.511        
cufflinks 6.281        
cufflinks 14.661     High High
cufflinks 6.564        
cufflinks 0.653       Low
cufflinks 6.65        
cufflinks 8.04     High  
cufflinks 0.511       Low
cufflinks 7.375     High  
cufflinks 1.207        

0 Strain