Gene : Glyma.15G245400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10052//PTHR10052:SF9 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  2454
Name:  ? Glyma.15G245400 Secondary Identifier:  ? PAC:30499216
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G245400 0.5kb upstream 0.5kb upstream 4443 true Chr15: 46745033-46749475 Glycine max
Glyma.15G245400 0.5kb upstream 0.5kb upstream 500 false Chr15: 46745033-46745532 Glycine max
Glyma.15G245400 0.5kb downstream 0.5kb downstream 4443 true Chr15: 46745533-46749975 Glycine max
Glyma.15G245400 0.5kb downstream 0.5kb downstream 500 false Chr15: 46749476-46749975 Glycine max
Glyma.15G245400 1.0kb upstream 1.0kb upstream 4943 true Chr15: 46744533-46749475 Glycine max
Glyma.15G245400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 46744533-46745532 Glycine max
Glyma.15G245400 1.0kb downstream 1.0kb downstream 4943 true Chr15: 46745533-46750475 Glycine max
Glyma.15G245400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 46749476-46750475 Glycine max
Glyma.15G245400 2.0kb upstream 2.0kb upstream 5943 true Chr15: 46743533-46749475 Glycine max
Glyma.15G245400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 46743533-46745532 Glycine max
Glyma.15G245400 2.0kb downstream 2.0kb downstream 5943 true Chr15: 46745533-46751475 Glycine max
Glyma.15G245400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 46749476-46751475 Glycine max
Glyma.15G245400 5.0kb upstream 5.0kb upstream 8943 true Chr15: 46740533-46749475 Glycine max
Glyma.15G245400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 46740533-46745532 Glycine max
Glyma.15G245400 5.0kb downstream 5.0kb downstream 8943 true Chr15: 46745533-46754475 Glycine max
Glyma.15G245400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 46749476-46754475 Glycine max
Glyma.15G245400 10.0kb upstream 10.0kb upstream 13943 true Chr15: 46735533-46749475 Glycine max
Glyma.15G245400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 46735533-46745532 Glycine max
Glyma.15G245400 10.0kb downstream 10.0kb downstream 13943 true Chr15: 46745533-46759475 Glycine max
Glyma.15G245400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 46749476-46759475 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301410 5265 Fabidae View MSA
124074454 5270 Rosid View MSA
123749667 5271 Pentapetalae View MSA
122791619 5272 Eudicot View MSA
122042118 5273 Angiosperm View MSA
121350772 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4886 0.0 44.0184   Low
cufflinks 17.786 0.0 55.4302    
cufflinks 20.2745 0.0 62.1811 High  
cufflinks 24.1462 0.0 104.691 High  
cufflinks 19.4354 0.0 59.6869    
cufflinks 27.4289 0.0 82.0944 High High
cufflinks 15.6158 0.0 49.3059    
cufflinks 26.7782 0.0 80.0895 High High
cufflinks 15.5857 0.0 49.3074    
cufflinks 2.138       High
cufflinks 1.4        
cufflinks 1.592        
cufflinks 1.497        
cufflinks 1.033        
cufflinks 1.041        
cufflinks 0.974       Low
cufflinks 2.67       High
cufflinks 1.648        
cufflinks 1.729        
cufflinks 0.877       Low
cufflinks 1.51        
cufflinks 1.011        
cufflinks 1.206        
cufflinks 1.273        
cufflinks 0.897       Low
cufflinks 1.911       High

0 Strain