Gene : Glyma.15G274800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Genomic Order:  2748
Name:  ? Glyma.15G274800 Secondary Identifier:  ? PAC:30498591
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G274800 0.5kb upstream 0.5kb upstream 4901 true Chr15: 51291261-51296161 Glycine max
Glyma.15G274800 0.5kb upstream 0.5kb upstream 500 false Chr15: 51295662-51296161 Glycine max
Glyma.15G274800 0.5kb downstream 0.5kb downstream 4901 true Chr15: 51290761-51295661 Glycine max
Glyma.15G274800 0.5kb downstream 0.5kb downstream 500 false Chr15: 51290761-51291260 Glycine max
Glyma.15G274800 1.0kb upstream 1.0kb upstream 5401 true Chr15: 51291261-51296661 Glycine max
Glyma.15G274800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 51295662-51296661 Glycine max
Glyma.15G274800 1.0kb downstream 1.0kb downstream 5401 true Chr15: 51290261-51295661 Glycine max
Glyma.15G274800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 51290261-51291260 Glycine max
Glyma.15G274800 2.0kb upstream 2.0kb upstream 6401 true Chr15: 51291261-51297661 Glycine max
Glyma.15G274800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 51295662-51297661 Glycine max
Glyma.15G274800 2.0kb downstream 2.0kb downstream 6401 true Chr15: 51289261-51295661 Glycine max
Glyma.15G274800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 51289261-51291260 Glycine max
Glyma.15G274800 5.0kb upstream 5.0kb upstream 9401 true Chr15: 51291261-51300661 Glycine max
Glyma.15G274800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 51295662-51300661 Glycine max
Glyma.15G274800 5.0kb downstream 5.0kb downstream 9401 true Chr15: 51286261-51295661 Glycine max
Glyma.15G274800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 51286261-51291260 Glycine max
Glyma.15G274800 10.0kb upstream 10.0kb upstream 14401 true Chr15: 51291261-51305661 Glycine max
Glyma.15G274800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 51295662-51305661 Glycine max
Glyma.15G274800 10.0kb downstream 10.0kb downstream 14401 true Chr15: 51281261-51295661 Glycine max
Glyma.15G274800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 51281261-51291260 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314270 5265 Fabidae View MSA
124070984 5270 Rosid View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6239 0.0 56.202    
cufflinks 26.9558 0.0 75.2043 High High
cufflinks 20.3742 0.0 55.5597 High  
cufflinks 19.7749 0.0 53.769    
cufflinks 22.3022 0.0 61.1469 High  
cufflinks 23.0172 0.0 63.3162 High  
cufflinks 15.9006 0.0 42.7193   Low
cufflinks 18.3008 0.0 49.5536    
cufflinks 14.2435 0.0 38.1523   Low
cufflinks 13.469     High  
cufflinks 9.573     High  
cufflinks 17.54     High  
cufflinks 11.751     High  
cufflinks 14.207     High  
cufflinks 7.657     High Low
cufflinks 15.36     High  
cufflinks 7.573     High Low
cufflinks 19.472     High High
cufflinks 22.632     High High
cufflinks 14.944     High  
cufflinks 8.167     High Low
cufflinks 16.217     High  
cufflinks 20.069     High High
cufflinks 10.745     High  
cufflinks 14.433     High  
cufflinks 8.847     High Low

0 Strain