Gene : Glyma.16G000300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31384:SF28 - AUXIN RESPONSE FACTOR 1 Genomic Order:  3
Name:  ? Glyma.16G000300 Secondary Identifier:  ? PAC:30561980
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G000300 0.5kb upstream 0.5kb upstream 7262 true Chr16: 25179-32440 Glycine max
Glyma.16G000300 0.5kb upstream 0.5kb upstream 500 false Chr16: 31941-32440 Glycine max
Glyma.16G000300 0.5kb downstream 0.5kb downstream 7262 true Chr16: 24679-31940 Glycine max
Glyma.16G000300 0.5kb downstream 0.5kb downstream 500 false Chr16: 24679-25178 Glycine max
Glyma.16G000300 1.0kb upstream 1.0kb upstream 7762 true Chr16: 25179-32940 Glycine max
Glyma.16G000300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31941-32940 Glycine max
Glyma.16G000300 1.0kb downstream 1.0kb downstream 7762 true Chr16: 24179-31940 Glycine max
Glyma.16G000300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 24179-25178 Glycine max
Glyma.16G000300 2.0kb upstream 2.0kb upstream 8762 true Chr16: 25179-33940 Glycine max
Glyma.16G000300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31941-33940 Glycine max
Glyma.16G000300 2.0kb downstream 2.0kb downstream 8762 true Chr16: 23179-31940 Glycine max
Glyma.16G000300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 23179-25178 Glycine max
Glyma.16G000300 5.0kb upstream 5.0kb upstream 11762 true Chr16: 25179-36940 Glycine max
Glyma.16G000300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31941-36940 Glycine max
Glyma.16G000300 5.0kb downstream 5.0kb downstream 11762 true Chr16: 20179-31940 Glycine max
Glyma.16G000300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 20179-25178 Glycine max
Glyma.16G000300 10.0kb upstream 10.0kb upstream 16762 true Chr16: 25179-41940 Glycine max
Glyma.16G000300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31941-41940 Glycine max
Glyma.16G000300 10.0kb downstream 10.0kb downstream 16762 true Chr16: 15179-31940 Glycine max
Glyma.16G000300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 15179-25178 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300985 5265 Fabidae View MSA
124069092 5270 Rosid View MSA
123739292 5271 Pentapetalae View MSA
122788624 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4543 0.0 27.8966    
cufflinks 11.3366 0.0 30.2451    
cufflinks 11.0489 0.0 29.478    
cufflinks 11.316 0.0 30.1908    
cufflinks 9.83061 0.0 26.2488    
cufflinks 6.25941 0.0 16.9772   Low
cufflinks 17.5879 0.0 47.4518   High
cufflinks 9.95156 0.0 26.5619    
cufflinks 7.97601 0.0 21.3976    
cufflinks 4.467        
cufflinks 4.233        
cufflinks 6.003        
cufflinks 4.825        
cufflinks 5.174        
cufflinks 4.28        
cufflinks 7.484     High High
cufflinks 2.484       Low
cufflinks 6.719        
cufflinks 7.142        
cufflinks 8.048     High High
cufflinks 4.579        
cufflinks 7.867     High High
cufflinks 7.09        
cufflinks 3.656       Low
cufflinks 7.653     High High
cufflinks 3.997        

0 Strain