Gene : Glyma.16G001800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24073:SF582 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  18
Name:  ? Glyma.16G001800 Secondary Identifier:  ? PAC:30558870
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G001800 0.5kb upstream 0.5kb upstream 1897 true Chr16: 100663-102559 Glycine max
Glyma.16G001800 0.5kb upstream 0.5kb upstream 500 false Chr16: 102060-102559 Glycine max
Glyma.16G001800 0.5kb downstream 0.5kb downstream 1897 true Chr16: 100163-102059 Glycine max
Glyma.16G001800 0.5kb downstream 0.5kb downstream 500 false Chr16: 100163-100662 Glycine max
Glyma.16G001800 1.0kb upstream 1.0kb upstream 2397 true Chr16: 100663-103059 Glycine max
Glyma.16G001800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 102060-103059 Glycine max
Glyma.16G001800 1.0kb downstream 1.0kb downstream 2397 true Chr16: 99663-102059 Glycine max
Glyma.16G001800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 99663-100662 Glycine max
Glyma.16G001800 2.0kb upstream 2.0kb upstream 3397 true Chr16: 100663-104059 Glycine max
Glyma.16G001800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 102060-104059 Glycine max
Glyma.16G001800 2.0kb downstream 2.0kb downstream 3397 true Chr16: 98663-102059 Glycine max
Glyma.16G001800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 98663-100662 Glycine max
Glyma.16G001800 5.0kb upstream 5.0kb upstream 6397 true Chr16: 100663-107059 Glycine max
Glyma.16G001800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 102060-107059 Glycine max
Glyma.16G001800 5.0kb downstream 5.0kb downstream 6397 true Chr16: 95663-102059 Glycine max
Glyma.16G001800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 95663-100662 Glycine max
Glyma.16G001800 10.0kb upstream 10.0kb upstream 11397 true Chr16: 100663-112059 Glycine max
Glyma.16G001800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 102060-112059 Glycine max
Glyma.16G001800 10.0kb downstream 10.0kb downstream 11397 true Chr16: 90663-102059 Glycine max
Glyma.16G001800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 90663-100662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299086 5265 Fabidae View MSA
124061309 5270 Rosid View MSA
123744507 5271 Pentapetalae View MSA
122787146 5272 Eudicot View MSA
122050000 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1197 0.0 38.841   Low
cufflinks 15.3052 0.0 41.9209    
cufflinks 11.8181 0.0 33.0457   Low
cufflinks 20.8656 0.0 56.1345 High  
cufflinks 30.2269 0.0 80.6418 High  
cufflinks 24.7239 0.0 66.1154 High  
cufflinks 27.4869 0.0 73.3945 High  
cufflinks 35.5331 0.0 94.8971 High High
cufflinks 21.8164 0.0 58.5564 High  
cufflinks 32.82     High High
cufflinks 19.042     High  
cufflinks 9.441     High Low
cufflinks 23.077     High  
cufflinks 28.634     High High
cufflinks 18.337     High  
cufflinks 14.273     High  
cufflinks 15.012     High  
cufflinks 12.717     High  
cufflinks 14.724     High  
cufflinks 12.156     High  
cufflinks 19.46     High  
cufflinks 12.835     High  
cufflinks 10.56     High Low
cufflinks 22.358     High  
cufflinks 12.742     High  
cufflinks 17.544     High  

0 Strain