Gene : Glyma.15G271200 G. max Wm82.a2.v1
Defline:  (1 of 43) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  2712
Name:  ? Glyma.15G271200 Secondary Identifier:  ? PAC:30498163
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G271200 0.5kb upstream 0.5kb upstream 5046 true Chr15: 50848277-50853322 Glycine max
Glyma.15G271200 0.5kb upstream 0.5kb upstream 500 false Chr15: 50852823-50853322 Glycine max
Glyma.15G271200 0.5kb downstream 0.5kb downstream 5046 true Chr15: 50847777-50852822 Glycine max
Glyma.15G271200 0.5kb downstream 0.5kb downstream 500 false Chr15: 50847777-50848276 Glycine max
Glyma.15G271200 1.0kb upstream 1.0kb upstream 5546 true Chr15: 50848277-50853822 Glycine max
Glyma.15G271200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 50852823-50853822 Glycine max
Glyma.15G271200 1.0kb downstream 1.0kb downstream 5546 true Chr15: 50847277-50852822 Glycine max
Glyma.15G271200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 50847277-50848276 Glycine max
Glyma.15G271200 2.0kb upstream 2.0kb upstream 6546 true Chr15: 50848277-50854822 Glycine max
Glyma.15G271200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 50852823-50854822 Glycine max
Glyma.15G271200 2.0kb downstream 2.0kb downstream 6546 true Chr15: 50846277-50852822 Glycine max
Glyma.15G271200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 50846277-50848276 Glycine max
Glyma.15G271200 5.0kb upstream 5.0kb upstream 9546 true Chr15: 50848277-50857822 Glycine max
Glyma.15G271200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 50852823-50857822 Glycine max
Glyma.15G271200 5.0kb downstream 5.0kb downstream 9546 true Chr15: 50843277-50852822 Glycine max
Glyma.15G271200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 50843277-50848276 Glycine max
Glyma.15G271200 10.0kb upstream 10.0kb upstream 14546 true Chr15: 50848277-50862822 Glycine max
Glyma.15G271200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 50852823-50862822 Glycine max
Glyma.15G271200 10.0kb downstream 10.0kb downstream 14546 true Chr15: 50838277-50852822 Glycine max
Glyma.15G271200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 50838277-50848276 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026282 5273 Angiosperm View MSA
122303305 5265 Fabidae View MSA
124063471 5270 Rosid View MSA
123737164 5271 Pentapetalae View MSA
122793364 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121296259 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.8674 0.0 79.704 High High
cufflinks 20.7879 0.0 55.6979 High High
cufflinks 3.83722 0.0 12.2903    
cufflinks 4.53338 0.0 14.128    
cufflinks 4.56991 0.0 14.1732    
cufflinks 4.23014 0.0 13.2919    
cufflinks 8.57876 0.0 24.4812    
cufflinks 3.73867 0.0 11.9544    
cufflinks 2.7657 0.0 9.20905   Low
cufflinks 2.747        
cufflinks 0.204       Low
cufflinks 1.723        
cufflinks 0.435        
cufflinks 0.629        
cufflinks 0.497        
cufflinks 24.398     High High
cufflinks 0.226       Low
cufflinks 1.754        
cufflinks 4.169        
cufflinks 24.042     High High
cufflinks 0.289        
cufflinks 20.041     High High
cufflinks 20.436     High High
cufflinks 0.169       Low
cufflinks 23.75     High High
cufflinks 0.196       Low

0 Strain