Gene : Glyma.15G261300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  2613
Name:  ? Glyma.15G261300 Secondary Identifier:  ? PAC:30496040
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G261300 0.5kb upstream 0.5kb upstream 3626 true Chr15: 49382002-49385627 Glycine max
Glyma.15G261300 0.5kb upstream 0.5kb upstream 500 false Chr15: 49382002-49382501 Glycine max
Glyma.15G261300 0.5kb downstream 0.5kb downstream 3626 true Chr15: 49382502-49386127 Glycine max
Glyma.15G261300 0.5kb downstream 0.5kb downstream 500 false Chr15: 49385628-49386127 Glycine max
Glyma.15G261300 1.0kb upstream 1.0kb upstream 4126 true Chr15: 49381502-49385627 Glycine max
Glyma.15G261300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 49381502-49382501 Glycine max
Glyma.15G261300 1.0kb downstream 1.0kb downstream 4126 true Chr15: 49382502-49386627 Glycine max
Glyma.15G261300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 49385628-49386627 Glycine max
Glyma.15G261300 2.0kb upstream 2.0kb upstream 5126 true Chr15: 49380502-49385627 Glycine max
Glyma.15G261300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 49380502-49382501 Glycine max
Glyma.15G261300 2.0kb downstream 2.0kb downstream 5126 true Chr15: 49382502-49387627 Glycine max
Glyma.15G261300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 49385628-49387627 Glycine max
Glyma.15G261300 5.0kb upstream 5.0kb upstream 8126 true Chr15: 49377502-49385627 Glycine max
Glyma.15G261300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 49377502-49382501 Glycine max
Glyma.15G261300 5.0kb downstream 5.0kb downstream 8126 true Chr15: 49382502-49390627 Glycine max
Glyma.15G261300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 49385628-49390627 Glycine max
Glyma.15G261300 10.0kb upstream 10.0kb upstream 13126 true Chr15: 49372502-49385627 Glycine max
Glyma.15G261300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 49372502-49382501 Glycine max
Glyma.15G261300 10.0kb downstream 10.0kb downstream 13126 true Chr15: 49382502-49395627 Glycine max
Glyma.15G261300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 49385628-49395627 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306382 5265 Fabidae View MSA
124067484 5270 Rosid View MSA
123752429 5271 Pentapetalae View MSA
122774553 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2163 0.0 41.1302    
cufflinks 15.687 0.0 47.8644    
cufflinks 22.1996 0.0 66.7351 High High
cufflinks 10.1525 0.0 37.7023    
cufflinks 8.13687 0.0 31.8687   Low
cufflinks 13.4889 0.0 43.5531    
cufflinks 12.345 0.0 44.4316    
cufflinks 13.3685 0.0 41.2594    
cufflinks 13.9626 0.0 49.5881    
cufflinks 5.533        
cufflinks 3.046        
cufflinks 4.566        
cufflinks 3.021        
cufflinks 0.796       Low
cufflinks 2.413        
cufflinks 2.132        
cufflinks 22.942     High High
cufflinks 2.912        
cufflinks 4.827        
cufflinks 1.593        
cufflinks 2.702        
cufflinks 1.855        
cufflinks 4.002        
cufflinks 2.704        
cufflinks 1.689        
cufflinks 5.469        

0 Strain