Gene : Glyma.15G262700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR36411:SF2 - PHOTOSYSTEM II REACTION CENTER PROTEIN T Genomic Order:  2627
Name:  ? Glyma.15G262700 Secondary Identifier:  ? PAC:30499287
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G262700 0.5kb upstream 0.5kb upstream 605 true Chr15: 49552224-49552828 Glycine max
Glyma.15G262700 0.5kb upstream 0.5kb upstream 500 false Chr15: 49552329-49552828 Glycine max
Glyma.15G262700 0.5kb downstream 0.5kb downstream 605 true Chr15: 49551724-49552328 Glycine max
Glyma.15G262700 0.5kb downstream 0.5kb downstream 500 false Chr15: 49551724-49552223 Glycine max
Glyma.15G262700 1.0kb upstream 1.0kb upstream 1105 true Chr15: 49552224-49553328 Glycine max
Glyma.15G262700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 49552329-49553328 Glycine max
Glyma.15G262700 1.0kb downstream 1.0kb downstream 1105 true Chr15: 49551224-49552328 Glycine max
Glyma.15G262700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 49551224-49552223 Glycine max
Glyma.15G262700 2.0kb upstream 2.0kb upstream 2105 true Chr15: 49552224-49554328 Glycine max
Glyma.15G262700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 49552329-49554328 Glycine max
Glyma.15G262700 2.0kb downstream 2.0kb downstream 2105 true Chr15: 49550224-49552328 Glycine max
Glyma.15G262700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 49550224-49552223 Glycine max
Glyma.15G262700 5.0kb upstream 5.0kb upstream 5105 true Chr15: 49552224-49557328 Glycine max
Glyma.15G262700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 49552329-49557328 Glycine max
Glyma.15G262700 5.0kb downstream 5.0kb downstream 5105 true Chr15: 49547224-49552328 Glycine max
Glyma.15G262700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 49547224-49552223 Glycine max
Glyma.15G262700 10.0kb upstream 10.0kb upstream 10105 true Chr15: 49552224-49562328 Glycine max
Glyma.15G262700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 49552329-49562328 Glycine max
Glyma.15G262700 10.0kb downstream 10.0kb downstream 10105 true Chr15: 49542224-49552328 Glycine max
Glyma.15G262700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 49542224-49552223 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029198 5273 Angiosperm View MSA
122241084 5265 Fabidae Singleton cluster - no MSA
124037996 5270 Rosid View MSA
123745161 5271 Pentapetalae View MSA
122796453 5272 Eudicot View MSA
121298572 5274 Embryophyte View MSA
123336536 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.398        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain