Gene : Glyma.16G018500 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein Genomic Order:  185
Name:  ? Glyma.16G018500 Secondary Identifier:  ? PAC:30560666
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-622 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G018500 0.5kb upstream 0.5kb upstream 5115 true Chr16: 1642918-1648032 Glycine max
Glyma.16G018500 0.5kb upstream 0.5kb upstream 500 false Chr16: 1642918-1643417 Glycine max
Glyma.16G018500 0.5kb downstream 0.5kb downstream 5115 true Chr16: 1643418-1648532 Glycine max
Glyma.16G018500 0.5kb downstream 0.5kb downstream 500 false Chr16: 1648033-1648532 Glycine max
Glyma.16G018500 1.0kb upstream 1.0kb upstream 5615 true Chr16: 1642418-1648032 Glycine max
Glyma.16G018500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1642418-1643417 Glycine max
Glyma.16G018500 1.0kb downstream 1.0kb downstream 5615 true Chr16: 1643418-1649032 Glycine max
Glyma.16G018500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1648033-1649032 Glycine max
Glyma.16G018500 2.0kb upstream 2.0kb upstream 6615 true Chr16: 1641418-1648032 Glycine max
Glyma.16G018500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1641418-1643417 Glycine max
Glyma.16G018500 2.0kb downstream 2.0kb downstream 6615 true Chr16: 1643418-1650032 Glycine max
Glyma.16G018500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1648033-1650032 Glycine max
Glyma.16G018500 5.0kb upstream 5.0kb upstream 9615 true Chr16: 1638418-1648032 Glycine max
Glyma.16G018500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1638418-1643417 Glycine max
Glyma.16G018500 5.0kb downstream 5.0kb downstream 9615 true Chr16: 1643418-1653032 Glycine max
Glyma.16G018500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1648033-1653032 Glycine max
Glyma.16G018500 10.0kb upstream 10.0kb upstream 14615 true Chr16: 1633418-1648032 Glycine max
Glyma.16G018500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1633418-1643417 Glycine max
Glyma.16G018500 10.0kb downstream 10.0kb downstream 14615 true Chr16: 1643418-1658032 Glycine max
Glyma.16G018500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1648033-1658032 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311550 5265 Fabidae View MSA
124071103 5270 Rosid View MSA
123740626 5271 Pentapetalae View MSA
122790728 5272 Eudicot View MSA
122042612 5273 Angiosperm View MSA
121345518 5274 Embryophyte View MSA
123424723 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 108.788 0.0 560.105 High High
cufflinks 30.4317 0.0 101.542 High  
cufflinks 9.81818 0.0 29.979    
cufflinks 42.0613 0.0 148.731 High  
cufflinks 17.8947 0.0 54.2324    
cufflinks 2.75391 0.0 10.4701   Low
cufflinks 97.8211 0.0 474.6 High High
cufflinks 67.5534 0.0 280.486 High  
cufflinks 5.70484 0.0 19.2609   Low
cufflinks 18.401     High  
cufflinks 0.01     Low Low
cufflinks 4.787        
cufflinks 0.638        
cufflinks 0.437        
cufflinks 1.255        
cufflinks 16.498     High  
cufflinks 0.293        
cufflinks 6.41        
cufflinks 12.771     High  
cufflinks 11.922     High  
cufflinks 0.092       Low
cufflinks 16.17     High  
cufflinks 26.509     High High
cufflinks 0.035     Low Low
cufflinks 16.632     High  
cufflinks 0.075       Low

0 Strain