Gene : Glyma.16G019700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32295:SF0 - PROTEIN IQ-DOMAIN 17-RELATED Genomic Order:  197
Name:  ? Glyma.16G019700 Secondary Identifier:  ? PAC:30560141
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G019700 0.5kb upstream 0.5kb upstream 3767 true Chr16: 1775404-1779170 Glycine max
Glyma.16G019700 0.5kb upstream 0.5kb upstream 500 false Chr16: 1775404-1775903 Glycine max
Glyma.16G019700 0.5kb downstream 0.5kb downstream 3767 true Chr16: 1775904-1779670 Glycine max
Glyma.16G019700 0.5kb downstream 0.5kb downstream 500 false Chr16: 1779171-1779670 Glycine max
Glyma.16G019700 1.0kb upstream 1.0kb upstream 4267 true Chr16: 1774904-1779170 Glycine max
Glyma.16G019700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1774904-1775903 Glycine max
Glyma.16G019700 1.0kb downstream 1.0kb downstream 4267 true Chr16: 1775904-1780170 Glycine max
Glyma.16G019700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1779171-1780170 Glycine max
Glyma.16G019700 2.0kb upstream 2.0kb upstream 5267 true Chr16: 1773904-1779170 Glycine max
Glyma.16G019700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1773904-1775903 Glycine max
Glyma.16G019700 2.0kb downstream 2.0kb downstream 5267 true Chr16: 1775904-1781170 Glycine max
Glyma.16G019700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1779171-1781170 Glycine max
Glyma.16G019700 5.0kb upstream 5.0kb upstream 8267 true Chr16: 1770904-1779170 Glycine max
Glyma.16G019700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1770904-1775903 Glycine max
Glyma.16G019700 5.0kb downstream 5.0kb downstream 8267 true Chr16: 1775904-1784170 Glycine max
Glyma.16G019700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1779171-1784170 Glycine max
Glyma.16G019700 10.0kb upstream 10.0kb upstream 13267 true Chr16: 1765904-1779170 Glycine max
Glyma.16G019700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1765904-1775903 Glycine max
Glyma.16G019700 10.0kb downstream 10.0kb downstream 13267 true Chr16: 1775904-1789170 Glycine max
Glyma.16G019700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1779171-1789170 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304863 5265 Fabidae View MSA
124071715 5270 Rosid View MSA
123753105 5271 Pentapetalae View MSA
122793516 5272 Eudicot View MSA
122042835 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.27137 0.0 4.14243   Low
cufflinks 16.7678 0.0 45.19   High
cufflinks 1.92431 0.0 5.89523    
cufflinks 2.00401 0.0 6.10619    
cufflinks 11.3841 0.0 30.3793    
cufflinks 4.95214 0.0 13.6099    
cufflinks 9.22272 0.0 24.6283    
cufflinks 2.94935 0.0 8.52648    
cufflinks 10.0093 0.0 26.7089    
cufflinks 14.541     High High
cufflinks 0.715       Low
cufflinks 4.234        
cufflinks 12.049     High  
cufflinks 15.776     High High
cufflinks 10.819     High  
cufflinks 5.576        
cufflinks 1.572        
cufflinks 11.256     High  
cufflinks 12.16     High  
cufflinks 4.142        
cufflinks 0.873       Low
cufflinks 5.583        
cufflinks 4.177        
cufflinks 0.492       Low
cufflinks 4.405        
cufflinks 1.876        

0 Strain