Gene : Glyma.16G015500 G. max Wm82.a2.v1
Defline:  (1 of 34) PTHR23073 - 26S PROTEASE REGULATORY SUBUNIT Genomic Order:  155
Name:  ? Glyma.16G015500 Secondary Identifier:  ? PAC:30561481
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G015500 0.5kb upstream 0.5kb upstream 4357 true Chr16: 1360193-1364549 Glycine max
Glyma.16G015500 0.5kb upstream 0.5kb upstream 500 false Chr16: 1364050-1364549 Glycine max
Glyma.16G015500 0.5kb downstream 0.5kb downstream 4357 true Chr16: 1359693-1364049 Glycine max
Glyma.16G015500 0.5kb downstream 0.5kb downstream 500 false Chr16: 1359693-1360192 Glycine max
Glyma.16G015500 1.0kb upstream 1.0kb upstream 4857 true Chr16: 1360193-1365049 Glycine max
Glyma.16G015500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1364050-1365049 Glycine max
Glyma.16G015500 1.0kb downstream 1.0kb downstream 4857 true Chr16: 1359193-1364049 Glycine max
Glyma.16G015500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1359193-1360192 Glycine max
Glyma.16G015500 2.0kb upstream 2.0kb upstream 5857 true Chr16: 1360193-1366049 Glycine max
Glyma.16G015500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1364050-1366049 Glycine max
Glyma.16G015500 2.0kb downstream 2.0kb downstream 5857 true Chr16: 1358193-1364049 Glycine max
Glyma.16G015500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1358193-1360192 Glycine max
Glyma.16G015500 5.0kb upstream 5.0kb upstream 8857 true Chr16: 1360193-1369049 Glycine max
Glyma.16G015500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1364050-1369049 Glycine max
Glyma.16G015500 5.0kb downstream 5.0kb downstream 8857 true Chr16: 1355193-1364049 Glycine max
Glyma.16G015500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1355193-1360192 Glycine max
Glyma.16G015500 10.0kb upstream 10.0kb upstream 13857 true Chr16: 1360193-1374049 Glycine max
Glyma.16G015500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1364050-1374049 Glycine max
Glyma.16G015500 10.0kb downstream 10.0kb downstream 13857 true Chr16: 1350193-1364049 Glycine max
Glyma.16G015500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1350193-1360192 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314667 5265 Fabidae View MSA
124068785 5270 Rosid View MSA
123737965 5271 Pentapetalae View MSA
122792051 5272 Eudicot View MSA
122047363 5273 Angiosperm View MSA
121351004 5274 Embryophyte View MSA
123424117 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.6627 0.0 94.8824 High Low
cufflinks 43.1974 0.0 120.594 High  
cufflinks 41.3407 0.0 115.161 High  
cufflinks 38.1196 0.0 105.212 High  
cufflinks 47.5786 0.0 134.06 High  
cufflinks 70.3007 0.0 208.587 High High
cufflinks 36.0881 0.0 98.9392 High  
cufflinks 47.6519 0.0 134.658 High  
cufflinks 41.0449 0.0 113.968 High  
cufflinks 23.053     High  
cufflinks 14.415     High  
cufflinks 16.969     High  
cufflinks 31.693     High High
cufflinks 32.151     High High
cufflinks 10.182     High Low
cufflinks 18.279     High  
cufflinks 14.604     High  
cufflinks 17.3     High  
cufflinks 21.456     High  
cufflinks 18.256     High  
cufflinks 15.061     High  
cufflinks 17.93     High  
cufflinks 21.466     High  
cufflinks 16.669     High  
cufflinks 17.757     High  
cufflinks 16.025     High  

0 Strain