Gene : Glyma.16G008800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34788:SF1 - F15I1.22 Genomic Order:  88
Name:  ? Glyma.16G008800 Secondary Identifier:  ? PAC:30561156
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G008800 0.5kb upstream 0.5kb upstream 1342 true Chr16: 761969-763310 Glycine max
Glyma.16G008800 0.5kb upstream 0.5kb upstream 500 false Chr16: 762811-763310 Glycine max
Glyma.16G008800 0.5kb downstream 0.5kb downstream 1342 true Chr16: 761469-762810 Glycine max
Glyma.16G008800 0.5kb downstream 0.5kb downstream 500 false Chr16: 761469-761968 Glycine max
Glyma.16G008800 1.0kb upstream 1.0kb upstream 1842 true Chr16: 761969-763810 Glycine max
Glyma.16G008800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 762811-763810 Glycine max
Glyma.16G008800 1.0kb downstream 1.0kb downstream 1842 true Chr16: 760969-762810 Glycine max
Glyma.16G008800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 760969-761968 Glycine max
Glyma.16G008800 2.0kb upstream 2.0kb upstream 2842 true Chr16: 761969-764810 Glycine max
Glyma.16G008800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 762811-764810 Glycine max
Glyma.16G008800 2.0kb downstream 2.0kb downstream 2842 true Chr16: 759969-762810 Glycine max
Glyma.16G008800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 759969-761968 Glycine max
Glyma.16G008800 5.0kb upstream 5.0kb upstream 5842 true Chr16: 761969-767810 Glycine max
Glyma.16G008800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 762811-767810 Glycine max
Glyma.16G008800 5.0kb downstream 5.0kb downstream 5842 true Chr16: 756969-762810 Glycine max
Glyma.16G008800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 756969-761968 Glycine max
Glyma.16G008800 10.0kb upstream 10.0kb upstream 10842 true Chr16: 761969-772810 Glycine max
Glyma.16G008800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 762811-772810 Glycine max
Glyma.16G008800 10.0kb downstream 10.0kb downstream 10842 true Chr16: 751969-762810 Glycine max
Glyma.16G008800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 751969-761968 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026756 5273 Angiosperm View MSA
122306084 5265 Fabidae View MSA
124060408 5270 Rosid View MSA
123748070 5271 Pentapetalae View MSA
122790898 5272 Eudicot View MSA
121296533 5274 Embryophyte View MSA
123334681 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.81923 0.0 9.94929    
cufflinks 0.608307 0.0 2.33529    
cufflinks 0.0911846 0.0 0.379823 Low Low
cufflinks 2.87559 0.0 10.1115    
cufflinks 7.29372 0.0 23.0009   High
cufflinks 1.25692 0.0 4.6636    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.49194 0.0 12.0853    
cufflinks 0.017     Low Low
cufflinks 1.493        
cufflinks 0.263        
cufflinks 2.742       High
cufflinks 3.422       High
cufflinks 0.024     Low Low
cufflinks 0.024     Low Low
cufflinks 0.243        
cufflinks 0.991        
cufflinks 2.141        
cufflinks 0.084     Low  
cufflinks 2.217        
cufflinks 0.032     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.21        
cufflinks 0.04     Low Low
cufflinks 1.274        

0 Strain