Gene : Glyma.16G049500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24322:SF547 - ALCOHOL DEHYDROGENASE-LIKE PROTEIN Genomic Order:  495
Name:  ? Glyma.16G049500 Secondary Identifier:  ? PAC:30560726
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-695 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G049500 0.5kb upstream 0.5kb upstream 4403 true Chr16: 4737189-4741591 Glycine max
Glyma.16G049500 0.5kb upstream 0.5kb upstream 500 false Chr16: 4741092-4741591 Glycine max
Glyma.16G049500 0.5kb downstream 0.5kb downstream 4403 true Chr16: 4736689-4741091 Glycine max
Glyma.16G049500 0.5kb downstream 0.5kb downstream 500 false Chr16: 4736689-4737188 Glycine max
Glyma.16G049500 1.0kb upstream 1.0kb upstream 4903 true Chr16: 4737189-4742091 Glycine max
Glyma.16G049500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4741092-4742091 Glycine max
Glyma.16G049500 1.0kb downstream 1.0kb downstream 4903 true Chr16: 4736189-4741091 Glycine max
Glyma.16G049500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4736189-4737188 Glycine max
Glyma.16G049500 2.0kb upstream 2.0kb upstream 5903 true Chr16: 4737189-4743091 Glycine max
Glyma.16G049500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4741092-4743091 Glycine max
Glyma.16G049500 2.0kb downstream 2.0kb downstream 5903 true Chr16: 4735189-4741091 Glycine max
Glyma.16G049500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4735189-4737188 Glycine max
Glyma.16G049500 5.0kb upstream 5.0kb upstream 8903 true Chr16: 4737189-4746091 Glycine max
Glyma.16G049500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4741092-4746091 Glycine max
Glyma.16G049500 5.0kb downstream 5.0kb downstream 8903 true Chr16: 4732189-4741091 Glycine max
Glyma.16G049500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4732189-4737188 Glycine max
Glyma.16G049500 10.0kb upstream 10.0kb upstream 13903 true Chr16: 4737189-4751091 Glycine max
Glyma.16G049500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4741092-4751091 Glycine max
Glyma.16G049500 10.0kb downstream 10.0kb downstream 13903 true Chr16: 4727189-4741091 Glycine max
Glyma.16G049500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4727189-4737188 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299733 5265 Fabidae View MSA
124068499 5270 Rosid View MSA
123741629 5271 Pentapetalae View MSA
122790439 5272 Eudicot View MSA
122042361 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.649982 0.0 4.0357   Low
cufflinks 2.7525 0.0 12.4271    
cufflinks 1.42578 0.0 7.64423    
cufflinks 0.976452 0.0 5.66114    
cufflinks 19.4706 0.0 57.8925   High
cufflinks 15.1931 0.0 45.7044   High
cufflinks 2.51356 0.0 11.6868    
cufflinks 0.705871 0.0 4.31698   Low
cufflinks 5.46028 0.0 19.817    
cufflinks 0.898        
cufflinks 0.499        
cufflinks 0.397        
cufflinks 5.568       High
cufflinks 5.537       High
cufflinks 0.046     Low Low
cufflinks 1.197        
cufflinks 0.41        
cufflinks 1.198        
cufflinks 0.504        
cufflinks 1.042        
cufflinks 0.555        
cufflinks 1.138        
cufflinks 0.73        
cufflinks 0.369        
cufflinks 1.234        
cufflinks 0.813        

0 Strain