Gene : Glyma.16G052300 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22883:SF80 - PROTEIN S-ACYLTRANSFERASE 5-RELATED Genomic Order:  523
Name:  ? Glyma.16G052300 Secondary Identifier:  ? PAC:30558856
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G052300 0.5kb upstream 0.5kb upstream 6497 true Chr16: 5044347-5050843 Glycine max
Glyma.16G052300 0.5kb upstream 0.5kb upstream 500 false Chr16: 5044347-5044846 Glycine max
Glyma.16G052300 0.5kb downstream 0.5kb downstream 6497 true Chr16: 5044847-5051343 Glycine max
Glyma.16G052300 0.5kb downstream 0.5kb downstream 500 false Chr16: 5050844-5051343 Glycine max
Glyma.16G052300 1.0kb upstream 1.0kb upstream 6997 true Chr16: 5043847-5050843 Glycine max
Glyma.16G052300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5043847-5044846 Glycine max
Glyma.16G052300 1.0kb downstream 1.0kb downstream 6997 true Chr16: 5044847-5051843 Glycine max
Glyma.16G052300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5050844-5051843 Glycine max
Glyma.16G052300 2.0kb upstream 2.0kb upstream 7997 true Chr16: 5042847-5050843 Glycine max
Glyma.16G052300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5042847-5044846 Glycine max
Glyma.16G052300 2.0kb downstream 2.0kb downstream 7997 true Chr16: 5044847-5052843 Glycine max
Glyma.16G052300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5050844-5052843 Glycine max
Glyma.16G052300 5.0kb upstream 5.0kb upstream 10997 true Chr16: 5039847-5050843 Glycine max
Glyma.16G052300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5039847-5044846 Glycine max
Glyma.16G052300 5.0kb downstream 5.0kb downstream 10997 true Chr16: 5044847-5055843 Glycine max
Glyma.16G052300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5050844-5055843 Glycine max
Glyma.16G052300 10.0kb upstream 10.0kb upstream 15997 true Chr16: 5034847-5050843 Glycine max
Glyma.16G052300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5034847-5044846 Glycine max
Glyma.16G052300 10.0kb downstream 10.0kb downstream 15997 true Chr16: 5044847-5060843 Glycine max
Glyma.16G052300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5050844-5060843 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297358 5265 Fabidae View MSA
124064327 5270 Rosid View MSA
123741712 5271 Pentapetalae View MSA
122787049 5272 Eudicot View MSA
122047692 5273 Angiosperm View MSA
123428988 5275 Viridiplantae View MSA
121350909 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3073 0.0 50.5609   Low
cufflinks 16.9577 0.0 60.0476    
cufflinks 25.1594 0.0 92.7605 High High
cufflinks 22.7733 0.0 97.0092 High  
cufflinks 16.5329 0.0 58.7776    
cufflinks 25.5724 0.0 94.8377 High High
cufflinks 18.0464 0.0 64.9586    
cufflinks 20.2262 0.0 73.1874    
cufflinks 13.0568 0.0 53.1727   Low
cufflinks 3.282       High
cufflinks 1.343       Low
cufflinks 3.628       High
cufflinks 3.312       High
cufflinks 2.774        
cufflinks 0.984       Low
cufflinks 2.557        
cufflinks 1.685        
cufflinks 2.627        
cufflinks 3.013        
cufflinks 2.748        
cufflinks 1.962        
cufflinks 2.72        
cufflinks 2.129        
cufflinks 1.798        
cufflinks 2.642        
cufflinks 2.324        

0 Strain