Gene : Glyma.16G054300 G. max Wm82.a2.v1
Genomic Order:  543 Name:  ? Glyma.16G054300
Secondary Identifier:  ? PAC:30560379
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G054300 0.5kb upstream 0.5kb upstream 8862 true Chr16: 5296340-5305201 Glycine max
Glyma.16G054300 0.5kb upstream 0.5kb upstream 500 false Chr16: 5296340-5296839 Glycine max
Glyma.16G054300 0.5kb downstream 0.5kb downstream 8862 true Chr16: 5296840-5305701 Glycine max
Glyma.16G054300 0.5kb downstream 0.5kb downstream 500 false Chr16: 5305202-5305701 Glycine max
Glyma.16G054300 1.0kb upstream 1.0kb upstream 9362 true Chr16: 5295840-5305201 Glycine max
Glyma.16G054300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5295840-5296839 Glycine max
Glyma.16G054300 1.0kb downstream 1.0kb downstream 9362 true Chr16: 5296840-5306201 Glycine max
Glyma.16G054300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5305202-5306201 Glycine max
Glyma.16G054300 2.0kb upstream 2.0kb upstream 10362 true Chr16: 5294840-5305201 Glycine max
Glyma.16G054300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5294840-5296839 Glycine max
Glyma.16G054300 2.0kb downstream 2.0kb downstream 10362 true Chr16: 5296840-5307201 Glycine max
Glyma.16G054300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5305202-5307201 Glycine max
Glyma.16G054300 5.0kb upstream 5.0kb upstream 13362 true Chr16: 5291840-5305201 Glycine max
Glyma.16G054300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5291840-5296839 Glycine max
Glyma.16G054300 5.0kb downstream 5.0kb downstream 13362 true Chr16: 5296840-5310201 Glycine max
Glyma.16G054300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5305202-5310201 Glycine max
Glyma.16G054300 10.0kb upstream 10.0kb upstream 18362 true Chr16: 5286840-5305201 Glycine max
Glyma.16G054300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5286840-5296839 Glycine max
Glyma.16G054300 10.0kb downstream 10.0kb downstream 18362 true Chr16: 5296840-5315201 Glycine max
Glyma.16G054300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5305202-5315201 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040977 5273 Angiosperm View MSA
122310291 5265 Fabidae View MSA
124070978 5270 Rosid View MSA
123741365 5271 Pentapetalae View MSA
122790161 5272 Eudicot View MSA
121309780 5274 Embryophyte View MSA
123347441 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.297228 0.0 1.05349    
cufflinks 0.375696 0.0 1.3014    
cufflinks 0.317927 0.0 1.11394    
cufflinks 0.219032 0.0 0.790693    
cufflinks 0.227223 0.0 0.821644 Low  
cufflinks 0.124419 0.0 0.46426 Low Low
cufflinks 0.458221 0.0 1.56552    
cufflinks 2.62482 0.0 7.18297   High
cufflinks 0.331101 0.0 1.16151    
cufflinks 0.505       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.005     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.002     Low Low

0 Strain