Gene : Glyma.16G044900 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.2.1.12//1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase // Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Genomic Order:  449
Name:  ? Glyma.16G044900 Secondary Identifier:  ? PAC:30561430
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax CALVIN-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G044900 0.5kb upstream 0.5kb upstream 3641 true Chr16: 4259254-4262894 Glycine max
Glyma.16G044900 0.5kb upstream 0.5kb upstream 500 false Chr16: 4259254-4259753 Glycine max
Glyma.16G044900 0.5kb downstream 0.5kb downstream 3641 true Chr16: 4259754-4263394 Glycine max
Glyma.16G044900 0.5kb downstream 0.5kb downstream 500 false Chr16: 4262895-4263394 Glycine max
Glyma.16G044900 1.0kb upstream 1.0kb upstream 4141 true Chr16: 4258754-4262894 Glycine max
Glyma.16G044900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4258754-4259753 Glycine max
Glyma.16G044900 1.0kb downstream 1.0kb downstream 4141 true Chr16: 4259754-4263894 Glycine max
Glyma.16G044900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4262895-4263894 Glycine max
Glyma.16G044900 2.0kb upstream 2.0kb upstream 5141 true Chr16: 4257754-4262894 Glycine max
Glyma.16G044900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4257754-4259753 Glycine max
Glyma.16G044900 2.0kb downstream 2.0kb downstream 5141 true Chr16: 4259754-4264894 Glycine max
Glyma.16G044900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4262895-4264894 Glycine max
Glyma.16G044900 5.0kb upstream 5.0kb upstream 8141 true Chr16: 4254754-4262894 Glycine max
Glyma.16G044900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4254754-4259753 Glycine max
Glyma.16G044900 5.0kb downstream 5.0kb downstream 8141 true Chr16: 4259754-4267894 Glycine max
Glyma.16G044900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4262895-4267894 Glycine max
Glyma.16G044900 10.0kb upstream 10.0kb upstream 13141 true Chr16: 4249754-4262894 Glycine max
Glyma.16G044900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4249754-4259753 Glycine max
Glyma.16G044900 10.0kb downstream 10.0kb downstream 13141 true Chr16: 4259754-4272894 Glycine max
Glyma.16G044900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4262895-4272894 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303668 5265 Fabidae View MSA
124061607 5270 Rosid View MSA
123737488 5271 Pentapetalae View MSA
122795007 5272 Eudicot View MSA
122045489 5273 Angiosperm View MSA
121346351 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 365.894 0.0 1618.85 High High
cufflinks 151.756 0.0 516.666 High  
cufflinks 22.2606 0.0 59.5332 High  
cufflinks 93.3484 0.0 288.786 High  
cufflinks 13.0081 0.0 34.8686    
cufflinks 12.1654 0.0 32.7022    
cufflinks 77.6919 0.0 233.459 High  
cufflinks 50.873 0.0 144.768 High  
cufflinks 2.64384 0.0 8.33501   Low
cufflinks 87.088     High  
cufflinks 0.012     Low Low
cufflinks 26.296     High  
cufflinks 0.052     Low  
cufflinks 0.015     Low Low
cufflinks 0.092        
cufflinks 311.747     High High
cufflinks 0.004     Low Low
cufflinks 38.855     High  
cufflinks 96.537     High  
cufflinks 259.883     High  
cufflinks 0.027     Low Low
cufflinks 267.381     High  
cufflinks 272.265     High  
cufflinks 0.019     Low Low
cufflinks 296.847     High High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain