Gene : Glyma.16G045100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31062:SF15 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Genomic Order:  451
Name:  ? Glyma.16G045100 Secondary Identifier:  ? PAC:30561952
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G045100 0.5kb upstream 0.5kb upstream 2317 true Chr16: 4276764-4279080 Glycine max
Glyma.16G045100 0.5kb upstream 0.5kb upstream 500 false Chr16: 4278581-4279080 Glycine max
Glyma.16G045100 0.5kb downstream 0.5kb downstream 2317 true Chr16: 4276264-4278580 Glycine max
Glyma.16G045100 0.5kb downstream 0.5kb downstream 500 false Chr16: 4276264-4276763 Glycine max
Glyma.16G045100 1.0kb upstream 1.0kb upstream 2817 true Chr16: 4276764-4279580 Glycine max
Glyma.16G045100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4278581-4279580 Glycine max
Glyma.16G045100 1.0kb downstream 1.0kb downstream 2817 true Chr16: 4275764-4278580 Glycine max
Glyma.16G045100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4275764-4276763 Glycine max
Glyma.16G045100 2.0kb upstream 2.0kb upstream 3817 true Chr16: 4276764-4280580 Glycine max
Glyma.16G045100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4278581-4280580 Glycine max
Glyma.16G045100 2.0kb downstream 2.0kb downstream 3817 true Chr16: 4274764-4278580 Glycine max
Glyma.16G045100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4274764-4276763 Glycine max
Glyma.16G045100 5.0kb upstream 5.0kb upstream 6817 true Chr16: 4276764-4283580 Glycine max
Glyma.16G045100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4278581-4283580 Glycine max
Glyma.16G045100 5.0kb downstream 5.0kb downstream 6817 true Chr16: 4271764-4278580 Glycine max
Glyma.16G045100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4271764-4276763 Glycine max
Glyma.16G045100 10.0kb upstream 10.0kb upstream 11817 true Chr16: 4276764-4288580 Glycine max
Glyma.16G045100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4278581-4288580 Glycine max
Glyma.16G045100 10.0kb downstream 10.0kb downstream 11817 true Chr16: 4266764-4278580 Glycine max
Glyma.16G045100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4266764-4276763 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310000 5265 Fabidae View MSA
124063834 5270 Rosid View MSA
123740091 5271 Pentapetalae View MSA
122795119 5272 Eudicot View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 978.699 0.0 5267.06 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 63.7478 0.0 175.691 High  
cufflinks 122.841 0.0 366.891 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.72089 0.0 11.9745   Low
cufflinks 17.6112 0.0 47.5925    
cufflinks 67.324     High High
cufflinks 1.563        
cufflinks 372.492     High High
cufflinks 84.206     High High
cufflinks 38.772     High  
cufflinks 0.01     Low Low
cufflinks 0.019     Low Low
cufflinks 4.33        
cufflinks 24.683     High  
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.802     High  
cufflinks 0.026     Low Low
cufflinks 0.01     Low Low
cufflinks 0.624        
cufflinks 0.021     Low Low
cufflinks 10.747     High  

0 Strain