Gene : Glyma.16G045200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33450:SF5 - EMB Genomic Order:  452
Name:  ? Glyma.16G045200 Secondary Identifier:  ? PAC:30558818
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G045200 0.5kb upstream 0.5kb upstream 1136 true Chr16: 4295497-4296632 Glycine max
Glyma.16G045200 0.5kb upstream 0.5kb upstream 500 false Chr16: 4296133-4296632 Glycine max
Glyma.16G045200 0.5kb downstream 0.5kb downstream 1136 true Chr16: 4294997-4296132 Glycine max
Glyma.16G045200 0.5kb downstream 0.5kb downstream 500 false Chr16: 4294997-4295496 Glycine max
Glyma.16G045200 1.0kb upstream 1.0kb upstream 1636 true Chr16: 4295497-4297132 Glycine max
Glyma.16G045200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4296133-4297132 Glycine max
Glyma.16G045200 1.0kb downstream 1.0kb downstream 1636 true Chr16: 4294497-4296132 Glycine max
Glyma.16G045200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4294497-4295496 Glycine max
Glyma.16G045200 2.0kb upstream 2.0kb upstream 2636 true Chr16: 4295497-4298132 Glycine max
Glyma.16G045200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4296133-4298132 Glycine max
Glyma.16G045200 2.0kb downstream 2.0kb downstream 2636 true Chr16: 4293497-4296132 Glycine max
Glyma.16G045200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4293497-4295496 Glycine max
Glyma.16G045200 5.0kb upstream 5.0kb upstream 5636 true Chr16: 4295497-4301132 Glycine max
Glyma.16G045200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4296133-4301132 Glycine max
Glyma.16G045200 5.0kb downstream 5.0kb downstream 5636 true Chr16: 4290497-4296132 Glycine max
Glyma.16G045200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4290497-4295496 Glycine max
Glyma.16G045200 10.0kb upstream 10.0kb upstream 10636 true Chr16: 4295497-4306132 Glycine max
Glyma.16G045200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4296133-4306132 Glycine max
Glyma.16G045200 10.0kb downstream 10.0kb downstream 10636 true Chr16: 4285497-4296132 Glycine max
Glyma.16G045200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4285497-4295496 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309088 5265 Fabidae View MSA
124062808 5270 Rosid View MSA
123743467 5271 Pentapetalae View MSA
122796420 5272 Eudicot View MSA
122046487 5273 Angiosperm View MSA
121310612 5274 Embryophyte View MSA
123348052 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.160046 0.0 0.651998 Low Low
cufflinks 1.00782 0.0 3.80971    
cufflinks 2.50046 0.0 8.98564    
cufflinks 0.270893 0.0 1.07786   Low
cufflinks 3.20237 0.0 11.3056   High
cufflinks 1.27422 0.0 4.76753    
cufflinks 0.548586 0.0 2.12806    
cufflinks 1.18538 0.0 4.43461    
cufflinks 2.21188 0.0 8.01943    
cufflinks 16.995     High High
cufflinks 8.839     High  
cufflinks 9.506     High  
cufflinks 6.06        
cufflinks 10.316     High  
cufflinks 2.574        
cufflinks 0.784       Low
cufflinks 59.058     High High
cufflinks 4.61        
cufflinks 0.99        
cufflinks 0.764       Low
cufflinks 5.992     High  
cufflinks 0.703       Low
cufflinks 0.605       Low
cufflinks 3.112        
cufflinks 0.549       Low
cufflinks 7.782     High  

0 Strain