Gene : Glyma.16G046500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11594 - 40S RIBOSOMAL PROTEIN S27 Genomic Order:  465
Name:  ? Glyma.16G046500 Secondary Identifier:  ? PAC:30559510
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G046500 0.5kb upstream 0.5kb upstream 1814 true Chr16: 4427265-4429078 Glycine max
Glyma.16G046500 0.5kb upstream 0.5kb upstream 500 false Chr16: 4428579-4429078 Glycine max
Glyma.16G046500 0.5kb downstream 0.5kb downstream 1814 true Chr16: 4426765-4428578 Glycine max
Glyma.16G046500 0.5kb downstream 0.5kb downstream 500 false Chr16: 4426765-4427264 Glycine max
Glyma.16G046500 1.0kb upstream 1.0kb upstream 2314 true Chr16: 4427265-4429578 Glycine max
Glyma.16G046500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4428579-4429578 Glycine max
Glyma.16G046500 1.0kb downstream 1.0kb downstream 2314 true Chr16: 4426265-4428578 Glycine max
Glyma.16G046500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4426265-4427264 Glycine max
Glyma.16G046500 2.0kb upstream 2.0kb upstream 3314 true Chr16: 4427265-4430578 Glycine max
Glyma.16G046500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4428579-4430578 Glycine max
Glyma.16G046500 2.0kb downstream 2.0kb downstream 3314 true Chr16: 4425265-4428578 Glycine max
Glyma.16G046500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4425265-4427264 Glycine max
Glyma.16G046500 5.0kb upstream 5.0kb upstream 6314 true Chr16: 4427265-4433578 Glycine max
Glyma.16G046500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4428579-4433578 Glycine max
Glyma.16G046500 5.0kb downstream 5.0kb downstream 6314 true Chr16: 4422265-4428578 Glycine max
Glyma.16G046500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4422265-4427264 Glycine max
Glyma.16G046500 10.0kb upstream 10.0kb upstream 11314 true Chr16: 4427265-4438578 Glycine max
Glyma.16G046500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4428579-4438578 Glycine max
Glyma.16G046500 10.0kb downstream 10.0kb downstream 11314 true Chr16: 4417265-4428578 Glycine max
Glyma.16G046500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4417265-4427264 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041078 5273 Angiosperm View MSA
122247309 5265 Fabidae Singleton cluster - no MSA
124065866 5270 Rosid View MSA
123752077 5271 Pentapetalae View MSA
122796838 5272 Eudicot View MSA
121348120 5274 Embryophyte View MSA
123423805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 163.015 0.0 460.964 High  
cufflinks 151.226 0.0 424.91 High  
cufflinks 111.678 0.0 305.472 High Low
cufflinks 88.5469 0.0 238.645 High Low
cufflinks 275.801 0.0 841.644 High High
cufflinks 247.888 0.0 744.928 High High
cufflinks 186.47 0.0 536.743 High  
cufflinks 162.753 0.0 462.516 High  
cufflinks 164.22 0.0 466.914 High  
cufflinks 61.921     High  
cufflinks 29.396     High  
cufflinks 50.825     High  
cufflinks 137.697     High High
cufflinks 203.58     High High
cufflinks 20.879     High Low
cufflinks 36.393     High  
cufflinks 46.045     High  
cufflinks 47.019     High  
cufflinks 64.636     High  
cufflinks 23.808     High Low
cufflinks 40.058     High  
cufflinks 28.32     High  
cufflinks 50.199     High  
cufflinks 32.144     High  
cufflinks 30.767     High  
cufflinks 45.883     High  

0 Strain