Gene : Glyma.16G047100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR27003:SF68 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  471
Name:  ? Glyma.16G047100 Secondary Identifier:  ? PAC:30562242
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G047100 0.5kb upstream 0.5kb upstream 7200 true Chr16: 4464248-4471447 Glycine max
Glyma.16G047100 0.5kb upstream 0.5kb upstream 500 false Chr16: 4464248-4464747 Glycine max
Glyma.16G047100 0.5kb downstream 0.5kb downstream 7200 true Chr16: 4464748-4471947 Glycine max
Glyma.16G047100 0.5kb downstream 0.5kb downstream 500 false Chr16: 4471448-4471947 Glycine max
Glyma.16G047100 1.0kb upstream 1.0kb upstream 7700 true Chr16: 4463748-4471447 Glycine max
Glyma.16G047100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4463748-4464747 Glycine max
Glyma.16G047100 1.0kb downstream 1.0kb downstream 7700 true Chr16: 4464748-4472447 Glycine max
Glyma.16G047100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4471448-4472447 Glycine max
Glyma.16G047100 2.0kb upstream 2.0kb upstream 8700 true Chr16: 4462748-4471447 Glycine max
Glyma.16G047100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4462748-4464747 Glycine max
Glyma.16G047100 2.0kb downstream 2.0kb downstream 8700 true Chr16: 4464748-4473447 Glycine max
Glyma.16G047100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4471448-4473447 Glycine max
Glyma.16G047100 5.0kb upstream 5.0kb upstream 11700 true Chr16: 4459748-4471447 Glycine max
Glyma.16G047100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4459748-4464747 Glycine max
Glyma.16G047100 5.0kb downstream 5.0kb downstream 11700 true Chr16: 4464748-4476447 Glycine max
Glyma.16G047100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4471448-4476447 Glycine max
Glyma.16G047100 10.0kb upstream 10.0kb upstream 16700 true Chr16: 4454748-4471447 Glycine max
Glyma.16G047100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4454748-4464747 Glycine max
Glyma.16G047100 10.0kb downstream 10.0kb downstream 16700 true Chr16: 4464748-4481447 Glycine max
Glyma.16G047100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4471448-4481447 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304257 5265 Fabidae View MSA
124072336 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.45892 0.0 19.213   Low
cufflinks 10.8581 0.0 40.3272    
cufflinks 2.77977 0.0 14.5176   Low
cufflinks 16.208 0.0 57.1133    
cufflinks 12.4075 0.0 50.8409    
cufflinks 27.2619 0.0 99.4711 High High
cufflinks 10.6056 0.0 40.3851    
cufflinks 15.7105 0.0 58.6876    
cufflinks 13.0078 0.0 53.2213    
cufflinks 1.849       High
cufflinks 0.09       Low
cufflinks 0.558        
cufflinks 2.151       High
cufflinks 1.112        
cufflinks 0.153       Low
cufflinks 1.558        
cufflinks 0.298        
cufflinks 0.967        
cufflinks 1.403        
cufflinks 1.098        
cufflinks 0.157       Low
cufflinks 1.125        
cufflinks 0.941        
cufflinks 0.059     Low Low
cufflinks 1.013        
cufflinks 0.29        

0 Strain