Gene : Glyma.16G047400 G. max Wm82.a2.v1
Defline:  (1 of 5) PF12576 - Protein of unknown function (DUF3754) (DUF3754) Genomic Order:  474
Name:  ? Glyma.16G047400 Secondary Identifier:  ? PAC:30561338
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G047400 0.5kb upstream 0.5kb upstream 10177 true Chr16: 4503201-4513377 Glycine max
Glyma.16G047400 0.5kb upstream 0.5kb upstream 500 false Chr16: 4512878-4513377 Glycine max
Glyma.16G047400 0.5kb downstream 0.5kb downstream 10177 true Chr16: 4502701-4512877 Glycine max
Glyma.16G047400 0.5kb downstream 0.5kb downstream 500 false Chr16: 4502701-4503200 Glycine max
Glyma.16G047400 1.0kb upstream 1.0kb upstream 10677 true Chr16: 4503201-4513877 Glycine max
Glyma.16G047400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4512878-4513877 Glycine max
Glyma.16G047400 1.0kb downstream 1.0kb downstream 10677 true Chr16: 4502201-4512877 Glycine max
Glyma.16G047400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4502201-4503200 Glycine max
Glyma.16G047400 2.0kb upstream 2.0kb upstream 11677 true Chr16: 4503201-4514877 Glycine max
Glyma.16G047400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4512878-4514877 Glycine max
Glyma.16G047400 2.0kb downstream 2.0kb downstream 11677 true Chr16: 4501201-4512877 Glycine max
Glyma.16G047400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4501201-4503200 Glycine max
Glyma.16G047400 5.0kb upstream 5.0kb upstream 14677 true Chr16: 4503201-4517877 Glycine max
Glyma.16G047400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4512878-4517877 Glycine max
Glyma.16G047400 5.0kb downstream 5.0kb downstream 14677 true Chr16: 4498201-4512877 Glycine max
Glyma.16G047400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4498201-4503200 Glycine max
Glyma.16G047400 10.0kb upstream 10.0kb upstream 19677 true Chr16: 4503201-4522877 Glycine max
Glyma.16G047400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4512878-4522877 Glycine max
Glyma.16G047400 10.0kb downstream 10.0kb downstream 19677 true Chr16: 4493201-4512877 Glycine max
Glyma.16G047400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4493201-4503200 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307161 5265 Fabidae View MSA
124061722 5270 Rosid View MSA
123745886 5271 Pentapetalae View MSA
122795910 5272 Eudicot View MSA
122045487 5273 Angiosperm View MSA
121345129 5274 Embryophyte View MSA
123428488 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.013 0.0 80.5432 High  
cufflinks 16.2512 0.0 48.2241    
cufflinks 28.146 0.0 88.8341 High High
cufflinks 24.1188 0.0 74.1235 High  
cufflinks 12.9281 0.0 38.8132    
cufflinks 15.8784 0.0 47.0321    
cufflinks 10.4782 0.0 31.7512   Low
cufflinks 26.3153 0.0 81.906 High High
cufflinks 14.3584 0.0 42.5603    
cufflinks 8.122     High High
cufflinks 3.381        
cufflinks 4.238        
cufflinks 4.437        
cufflinks 2.98       Low
cufflinks 2.402       Low
cufflinks 6.971        
cufflinks 12.613     High High
cufflinks 5.112        
cufflinks 3.794        
cufflinks 6.542        
cufflinks 5.142        
cufflinks 7.376     High  
cufflinks 5.783        
cufflinks 2.475       Low
cufflinks 6.295        
cufflinks 5.631        

0 Strain