Gene : Glyma.16G029200 G. max Wm82.a2.v1
Defline:  (1 of 14) PF06697 - Protein of unknown function (DUF1191) (DUF1191) Genomic Order:  292
Name:  ? Glyma.16G029200 Secondary Identifier:  ? PAC:30560534
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G029200 0.5kb upstream 0.5kb upstream 2223 true Chr16: 2793203-2795425 Glycine max
Glyma.16G029200 0.5kb upstream 0.5kb upstream 500 false Chr16: 2794926-2795425 Glycine max
Glyma.16G029200 0.5kb downstream 0.5kb downstream 2223 true Chr16: 2792703-2794925 Glycine max
Glyma.16G029200 0.5kb downstream 0.5kb downstream 500 false Chr16: 2792703-2793202 Glycine max
Glyma.16G029200 1.0kb upstream 1.0kb upstream 2723 true Chr16: 2793203-2795925 Glycine max
Glyma.16G029200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2794926-2795925 Glycine max
Glyma.16G029200 1.0kb downstream 1.0kb downstream 2723 true Chr16: 2792203-2794925 Glycine max
Glyma.16G029200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2792203-2793202 Glycine max
Glyma.16G029200 2.0kb upstream 2.0kb upstream 3723 true Chr16: 2793203-2796925 Glycine max
Glyma.16G029200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2794926-2796925 Glycine max
Glyma.16G029200 2.0kb downstream 2.0kb downstream 3723 true Chr16: 2791203-2794925 Glycine max
Glyma.16G029200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2791203-2793202 Glycine max
Glyma.16G029200 5.0kb upstream 5.0kb upstream 6723 true Chr16: 2793203-2799925 Glycine max
Glyma.16G029200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2794926-2799925 Glycine max
Glyma.16G029200 5.0kb downstream 5.0kb downstream 6723 true Chr16: 2788203-2794925 Glycine max
Glyma.16G029200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2788203-2793202 Glycine max
Glyma.16G029200 10.0kb upstream 10.0kb upstream 11723 true Chr16: 2793203-2804925 Glycine max
Glyma.16G029200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2794926-2804925 Glycine max
Glyma.16G029200 10.0kb downstream 10.0kb downstream 11723 true Chr16: 2783203-2794925 Glycine max
Glyma.16G029200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2783203-2793202 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041468 5273 Angiosperm View MSA
122302728 5265 Fabidae View MSA
124062142 5270 Rosid View MSA
123747246 5271 Pentapetalae View MSA
122795856 5272 Eudicot View MSA
121351350 5274 Embryophyte View MSA
123382132 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.350475 0.0 3.05921    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.36991 0.0 12.3455   High
cufflinks 0.0795777 0.0 0.320289 Low  
cufflinks 0.0258214 0.0 0.116109 Low Low
cufflinks 0.160136 0.0 0.63201 Low  
cufflinks 0.13191 0.0 0.521578 Low  
cufflinks 0.044034 0.0 0.182813 Low  
cufflinks 0.368771 0.0 1.84782    
cufflinks 0.009     Low Low
cufflinks 0.073        
cufflinks 0.316        
cufflinks 0.319        
cufflinks 0.026     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.24        
cufflinks 0.036     Low  
cufflinks 1.127       High
cufflinks 0.015     Low Low
cufflinks 0.364        
cufflinks 0.052     Low  
cufflinks 0.4        
cufflinks 0.136        
cufflinks 0.074        
cufflinks 0.374        
cufflinks 0.05     Low  

0 Strain