Gene : Glyma.16G080700 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.1.1.97 - 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase / OHCU decarboxylase Genomic Order:  806
Name:  ? Glyma.16G080700 Secondary Identifier:  ? PAC:30559442
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5691 Glycine max pathologic  
Gmax URSIN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G080700 0.5kb upstream 0.5kb upstream 8556 true Chr16: 8575698-8584253 Glycine max
Glyma.16G080700 0.5kb upstream 0.5kb upstream 500 false Chr16: 8583754-8584253 Glycine max
Glyma.16G080700 0.5kb downstream 0.5kb downstream 8556 true Chr16: 8575198-8583753 Glycine max
Glyma.16G080700 0.5kb downstream 0.5kb downstream 500 false Chr16: 8575198-8575697 Glycine max
Glyma.16G080700 1.0kb upstream 1.0kb upstream 9056 true Chr16: 8575698-8584753 Glycine max
Glyma.16G080700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8583754-8584753 Glycine max
Glyma.16G080700 1.0kb downstream 1.0kb downstream 9056 true Chr16: 8574698-8583753 Glycine max
Glyma.16G080700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8574698-8575697 Glycine max
Glyma.16G080700 2.0kb upstream 2.0kb upstream 10056 true Chr16: 8575698-8585753 Glycine max
Glyma.16G080700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8583754-8585753 Glycine max
Glyma.16G080700 2.0kb downstream 2.0kb downstream 10056 true Chr16: 8573698-8583753 Glycine max
Glyma.16G080700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8573698-8575697 Glycine max
Glyma.16G080700 5.0kb upstream 5.0kb upstream 13056 true Chr16: 8575698-8588753 Glycine max
Glyma.16G080700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8583754-8588753 Glycine max
Glyma.16G080700 5.0kb downstream 5.0kb downstream 13056 true Chr16: 8570698-8583753 Glycine max
Glyma.16G080700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8570698-8575697 Glycine max
Glyma.16G080700 10.0kb upstream 10.0kb upstream 18056 true Chr16: 8575698-8593753 Glycine max
Glyma.16G080700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8583754-8593753 Glycine max
Glyma.16G080700 10.0kb downstream 10.0kb downstream 18056 true Chr16: 8565698-8583753 Glycine max
Glyma.16G080700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8565698-8575697 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308203 5265 Fabidae View MSA
124064202 5270 Rosid View MSA
123738377 5271 Pentapetalae View MSA
122792978 5272 Eudicot View MSA
122045927 5273 Angiosperm View MSA
121344098 5274 Embryophyte View MSA
123423784 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.12628 0.0 27.4794   Low
cufflinks 7.67323 0.0 29.2967    
cufflinks 8.39298 0.0 32.5088    
cufflinks 7.4486 0.0 29.1637    
cufflinks 10.241 0.0 37.8153    
cufflinks 8.9645 0.0 35.2544    
cufflinks 15.208 0.0 47.2577   High
cufflinks 5.81244 0.0 24.1071   Low
cufflinks 14.8918 0.0 46.8689   High
cufflinks 0.306       Low
cufflinks 0.21       Low
cufflinks 0.56        
cufflinks 0.502        
cufflinks 0.525        
cufflinks 0.807       High
cufflinks 0.56        
cufflinks 0.33        
cufflinks 0.638        
cufflinks 0.718       High
cufflinks 0.747       High
cufflinks 0.277       Low
cufflinks 0.631        
cufflinks 0.58        
cufflinks 0.309       Low
cufflinks 0.592        
cufflinks 0.367        

0 Strain