Gene : Glyma.16G080800 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  808
Name:  ? Glyma.16G080800 Secondary Identifier:  ? PAC:30560367
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G080800 0.5kb upstream 0.5kb upstream 2823 true Chr16: 8586897-8589719 Glycine max
Glyma.16G080800 0.5kb upstream 0.5kb upstream 500 false Chr16: 8589220-8589719 Glycine max
Glyma.16G080800 0.5kb downstream 0.5kb downstream 2823 true Chr16: 8586397-8589219 Glycine max
Glyma.16G080800 0.5kb downstream 0.5kb downstream 500 false Chr16: 8586397-8586896 Glycine max
Glyma.16G080800 1.0kb upstream 1.0kb upstream 3323 true Chr16: 8586897-8590219 Glycine max
Glyma.16G080800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8589220-8590219 Glycine max
Glyma.16G080800 1.0kb downstream 1.0kb downstream 3323 true Chr16: 8585897-8589219 Glycine max
Glyma.16G080800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8585897-8586896 Glycine max
Glyma.16G080800 2.0kb upstream 2.0kb upstream 4323 true Chr16: 8586897-8591219 Glycine max
Glyma.16G080800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8589220-8591219 Glycine max
Glyma.16G080800 2.0kb downstream 2.0kb downstream 4323 true Chr16: 8584897-8589219 Glycine max
Glyma.16G080800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8584897-8586896 Glycine max
Glyma.16G080800 5.0kb upstream 5.0kb upstream 7323 true Chr16: 8586897-8594219 Glycine max
Glyma.16G080800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8589220-8594219 Glycine max
Glyma.16G080800 5.0kb downstream 5.0kb downstream 7323 true Chr16: 8581897-8589219 Glycine max
Glyma.16G080800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8581897-8586896 Glycine max
Glyma.16G080800 10.0kb upstream 10.0kb upstream 12323 true Chr16: 8586897-8599219 Glycine max
Glyma.16G080800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8589220-8599219 Glycine max
Glyma.16G080800 10.0kb downstream 10.0kb downstream 12323 true Chr16: 8576897-8589219 Glycine max
Glyma.16G080800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8576897-8586896 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779217 5273 Angiosperm View MSA
122310596 5265 Fabidae View MSA
124070982 5270 Rosid View MSA
123741077 5271 Pentapetalae View MSA
122770004 5272 Eudicot View MSA
121050895 5274 Embryophyte View MSA
123091007 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.679 0.0 60.8843    
cufflinks 3.8493 0.0 13.4386    
cufflinks 22.9183 0.0 63.7609 High  
cufflinks 12.7336 0.0 38.0257    
cufflinks 11.334 0.0 34.5258    
cufflinks 71.9549 0.0 192.285 High High
cufflinks 0.849122 0.0 3.23576   Low
cufflinks 5.72892 0.0 19.1092    
cufflinks 8.87786 0.0 27.9602    
cufflinks 3.544        
cufflinks 1.947        
cufflinks 11.598     High High
cufflinks 2.703        
cufflinks 0.769       Low
cufflinks 1.827        
cufflinks 2.154        
cufflinks 6.053       High
cufflinks 5.593        
cufflinks 3.304        
cufflinks 2.527        
cufflinks 2.161        
cufflinks 2.854        
cufflinks 4.243        
cufflinks 5.377        
cufflinks 3.02        
cufflinks 4.05        

0 Strain