Gene : Glyma.16G082600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11771//PTHR11771:SF59 - LIPOXYGENASE Genomic Order:  826
Name:  ? Glyma.16G082600 Secondary Identifier:  ? PAC:30559140
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G082600 0.5kb upstream 0.5kb upstream 10653 true Chr16: 9227831-9238483 Glycine max
Glyma.16G082600 0.5kb upstream 0.5kb upstream 500 false Chr16: 9237984-9238483 Glycine max
Glyma.16G082600 0.5kb downstream 0.5kb downstream 10653 true Chr16: 9227331-9237983 Glycine max
Glyma.16G082600 0.5kb downstream 0.5kb downstream 500 false Chr16: 9227331-9227830 Glycine max
Glyma.16G082600 1.0kb upstream 1.0kb upstream 11153 true Chr16: 9227831-9238983 Glycine max
Glyma.16G082600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 9237984-9238983 Glycine max
Glyma.16G082600 1.0kb downstream 1.0kb downstream 11153 true Chr16: 9226831-9237983 Glycine max
Glyma.16G082600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 9226831-9227830 Glycine max
Glyma.16G082600 2.0kb upstream 2.0kb upstream 12153 true Chr16: 9227831-9239983 Glycine max
Glyma.16G082600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 9237984-9239983 Glycine max
Glyma.16G082600 2.0kb downstream 2.0kb downstream 12153 true Chr16: 9225831-9237983 Glycine max
Glyma.16G082600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 9225831-9227830 Glycine max
Glyma.16G082600 5.0kb upstream 5.0kb upstream 15153 true Chr16: 9227831-9242983 Glycine max
Glyma.16G082600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 9237984-9242983 Glycine max
Glyma.16G082600 5.0kb downstream 5.0kb downstream 15153 true Chr16: 9222831-9237983 Glycine max
Glyma.16G082600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 9222831-9227830 Glycine max
Glyma.16G082600 10.0kb upstream 10.0kb upstream 20153 true Chr16: 9227831-9247983 Glycine max
Glyma.16G082600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 9237984-9247983 Glycine max
Glyma.16G082600 10.0kb downstream 10.0kb downstream 20153 true Chr16: 9217831-9237983 Glycine max
Glyma.16G082600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 9217831-9227830 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303150 5265 Fabidae View MSA
124071390 5270 Rosid View MSA
123750052 5271 Pentapetalae View MSA
122773445 5272 Eudicot View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.077459 0.0 0.304413 Low  
cufflinks 0.122971 0.0 0.474183 Low  
cufflinks 0.0933217 0.0 0.363492 Low  
cufflinks 0.117091 0.0 0.452302 Low  
cufflinks 0.0731412 0.0 0.288163 Low  
cufflinks 0.0578843 0.0 0.229889 Low  
cufflinks 0.0136704 0.0 0.0588772 Low Low
cufflinks 0.156714 0.0 0.597412 Low  
cufflinks 0.214342 0.0 0.806547 Low High
cufflinks 0.218       High
cufflinks 0.099        
cufflinks 0.071     Low  
cufflinks 0.111        
cufflinks 0.03     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081     Low  
cufflinks 0.055     Low  
cufflinks 0.199       High
cufflinks 0.046     Low Low
cufflinks 0.104        
cufflinks 0.082        
cufflinks 0.144        
cufflinks 0.077     Low  
cufflinks 0.051     Low Low
cufflinks 0.119        
cufflinks 0.09        

0 Strain