Gene : Glyma.16G082700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11802:SF96 - SERINE CARBOXYPEPTIDASE-LIKE 20-RELATED Genomic Order:  827
Name:  ? Glyma.16G082700 Secondary Identifier:  ? PAC:30560563
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G082700 0.5kb upstream 0.5kb upstream 10419 true Chr16: 9310673-9321091 Glycine max
Glyma.16G082700 0.5kb upstream 0.5kb upstream 500 false Chr16: 9320592-9321091 Glycine max
Glyma.16G082700 0.5kb downstream 0.5kb downstream 10419 true Chr16: 9310173-9320591 Glycine max
Glyma.16G082700 0.5kb downstream 0.5kb downstream 500 false Chr16: 9310173-9310672 Glycine max
Glyma.16G082700 1.0kb upstream 1.0kb upstream 10919 true Chr16: 9310673-9321591 Glycine max
Glyma.16G082700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 9320592-9321591 Glycine max
Glyma.16G082700 1.0kb downstream 1.0kb downstream 10919 true Chr16: 9309673-9320591 Glycine max
Glyma.16G082700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 9309673-9310672 Glycine max
Glyma.16G082700 2.0kb upstream 2.0kb upstream 11919 true Chr16: 9310673-9322591 Glycine max
Glyma.16G082700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 9320592-9322591 Glycine max
Glyma.16G082700 2.0kb downstream 2.0kb downstream 11919 true Chr16: 9308673-9320591 Glycine max
Glyma.16G082700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 9308673-9310672 Glycine max
Glyma.16G082700 5.0kb upstream 5.0kb upstream 14919 true Chr16: 9310673-9325591 Glycine max
Glyma.16G082700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 9320592-9325591 Glycine max
Glyma.16G082700 5.0kb downstream 5.0kb downstream 14919 true Chr16: 9305673-9320591 Glycine max
Glyma.16G082700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 9305673-9310672 Glycine max
Glyma.16G082700 10.0kb upstream 10.0kb upstream 19919 true Chr16: 9310673-9330591 Glycine max
Glyma.16G082700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 9320592-9330591 Glycine max
Glyma.16G082700 10.0kb downstream 10.0kb downstream 19919 true Chr16: 9300673-9320591 Glycine max
Glyma.16G082700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 9300673-9310672 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041261 5273 Angiosperm View MSA
122300986 5265 Fabidae View MSA
124061169 5270 Rosid View MSA
123744248 5271 Pentapetalae View MSA
122789110 5272 Eudicot View MSA
121344496 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4741 0.0 72.4779    
cufflinks 15.368 0.0 56.235    
cufflinks 6.37217 0.0 24.264   Low
cufflinks 7.14471 0.0 34.6824    
cufflinks 17.949 0.0 76.5709    
cufflinks 17.4662 0.0 67.6447    
cufflinks 3.98036 0.0 15.8863   Low
cufflinks 26.7405 0.0 108.067 High High
cufflinks 25.4183 0.0 112.281 High  
cufflinks 1.357       High
cufflinks 0.405       Low
cufflinks 0.388       Low
cufflinks 1.437       High
cufflinks 1.235       High
cufflinks 0.153       Low
cufflinks 0.781        
cufflinks 1.052        
cufflinks 0.553        
cufflinks 0.788        
cufflinks 0.774        
cufflinks 0.537        
cufflinks 0.971        
cufflinks 1.016        
cufflinks 0.582        
cufflinks 0.651        
cufflinks 0.815        

0 Strain