Gene : Glyma.16G077900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10209:SF146 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED Genomic Order:  779
Name:  ? Glyma.16G077900 Secondary Identifier:  ? PAC:30560241
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G077900 0.5kb upstream 0.5kb upstream 5747 true Chr16: 8023101-8028847 Glycine max
Glyma.16G077900 0.5kb upstream 0.5kb upstream 500 false Chr16: 8028348-8028847 Glycine max
Glyma.16G077900 0.5kb downstream 0.5kb downstream 5747 true Chr16: 8022601-8028347 Glycine max
Glyma.16G077900 0.5kb downstream 0.5kb downstream 500 false Chr16: 8022601-8023100 Glycine max
Glyma.16G077900 1.0kb upstream 1.0kb upstream 6247 true Chr16: 8023101-8029347 Glycine max
Glyma.16G077900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8028348-8029347 Glycine max
Glyma.16G077900 1.0kb downstream 1.0kb downstream 6247 true Chr16: 8022101-8028347 Glycine max
Glyma.16G077900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8022101-8023100 Glycine max
Glyma.16G077900 2.0kb upstream 2.0kb upstream 7247 true Chr16: 8023101-8030347 Glycine max
Glyma.16G077900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8028348-8030347 Glycine max
Glyma.16G077900 2.0kb downstream 2.0kb downstream 7247 true Chr16: 8021101-8028347 Glycine max
Glyma.16G077900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8021101-8023100 Glycine max
Glyma.16G077900 5.0kb upstream 5.0kb upstream 10247 true Chr16: 8023101-8033347 Glycine max
Glyma.16G077900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8028348-8033347 Glycine max
Glyma.16G077900 5.0kb downstream 5.0kb downstream 10247 true Chr16: 8018101-8028347 Glycine max
Glyma.16G077900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8018101-8023100 Glycine max
Glyma.16G077900 10.0kb upstream 10.0kb upstream 15247 true Chr16: 8023101-8038347 Glycine max
Glyma.16G077900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8028348-8038347 Glycine max
Glyma.16G077900 10.0kb downstream 10.0kb downstream 15247 true Chr16: 8013101-8028347 Glycine max
Glyma.16G077900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8013101-8023100 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302067 5265 Fabidae View MSA
124061088 5270 Rosid View MSA
123745959 5271 Pentapetalae View MSA
122787426 5272 Eudicot View MSA
122044176 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121345815 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.1318 0.0 204.184 High High
cufflinks 0.929881 0.0 4.10169   Low
cufflinks 19.2524 0.0 65.595    
cufflinks 12.7185 0.0 44.2656    
cufflinks 5.47988 0.0 19.5238    
cufflinks 15.8866 0.0 54.5022    
cufflinks 18.1962 0.0 62.086    
cufflinks 5.6596 0.0 23.1158    
cufflinks 5.8985 0.0 23.8962    
cufflinks 2.054        
cufflinks 1.223        
cufflinks 1.812        
cufflinks 1.326        
cufflinks 0.658        
cufflinks 0.52        
cufflinks 0.351        
cufflinks 13.621     High High
cufflinks 0.821        
cufflinks 0.282        
cufflinks 0.06     Low Low
cufflinks 1.78        
cufflinks 0.237        
cufflinks 0.69        
cufflinks 2.14        
cufflinks 0.121       Low
cufflinks 6.945     High High

0 Strain