Gene : Glyma.16G078500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10485 - MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17 Genomic Order:  785
Name:  ? Glyma.16G078500 Secondary Identifier:  ? PAC:30559813
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G078500 0.5kb upstream 0.5kb upstream 1489 true Chr16: 8083511-8084999 Glycine max
Glyma.16G078500 0.5kb upstream 0.5kb upstream 500 false Chr16: 8083511-8084010 Glycine max
Glyma.16G078500 0.5kb downstream 0.5kb downstream 1489 true Chr16: 8084011-8085499 Glycine max
Glyma.16G078500 0.5kb downstream 0.5kb downstream 500 false Chr16: 8085000-8085499 Glycine max
Glyma.16G078500 1.0kb upstream 1.0kb upstream 1989 true Chr16: 8083011-8084999 Glycine max
Glyma.16G078500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8083011-8084010 Glycine max
Glyma.16G078500 1.0kb downstream 1.0kb downstream 1989 true Chr16: 8084011-8085999 Glycine max
Glyma.16G078500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8085000-8085999 Glycine max
Glyma.16G078500 2.0kb upstream 2.0kb upstream 2989 true Chr16: 8082011-8084999 Glycine max
Glyma.16G078500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8082011-8084010 Glycine max
Glyma.16G078500 2.0kb downstream 2.0kb downstream 2989 true Chr16: 8084011-8086999 Glycine max
Glyma.16G078500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8085000-8086999 Glycine max
Glyma.16G078500 5.0kb upstream 5.0kb upstream 5989 true Chr16: 8079011-8084999 Glycine max
Glyma.16G078500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8079011-8084010 Glycine max
Glyma.16G078500 5.0kb downstream 5.0kb downstream 5989 true Chr16: 8084011-8089999 Glycine max
Glyma.16G078500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8085000-8089999 Glycine max
Glyma.16G078500 10.0kb upstream 10.0kb upstream 10989 true Chr16: 8074011-8084999 Glycine max
Glyma.16G078500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8074011-8084010 Glycine max
Glyma.16G078500 10.0kb downstream 10.0kb downstream 10989 true Chr16: 8084011-8094999 Glycine max
Glyma.16G078500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8085000-8094999 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040937 5273 Angiosperm View MSA
122310705 5265 Fabidae View MSA
124067185 5270 Rosid View MSA
123748525 5271 Pentapetalae View MSA
122797820 5272 Eudicot View MSA
121346917 5274 Embryophyte View MSA
123426067 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8742 0.0 33.3204    
cufflinks 5.78744 0.0 17.968   Low
cufflinks 13.6636 0.0 38.3533   High
cufflinks 8.78969 0.0 25.7537    
cufflinks 11.924 0.0 33.2098    
cufflinks 6.9478 0.0 20.779   Low
cufflinks 10.9416 0.0 30.8829    
cufflinks 10.7582 0.0 30.7033    
cufflinks 9.80023 0.0 28.1371    
cufflinks 6.172        
cufflinks 6.084     High  
cufflinks 7.14       High
cufflinks 5.411        
cufflinks 6.492        
cufflinks 5.417     High  
cufflinks 5.071        
cufflinks 7.885     High High
cufflinks 5.344        
cufflinks 4.291       Low
cufflinks 3.46       Low
cufflinks 6.589     High  
cufflinks 4.614        
cufflinks 4.44        
cufflinks 6.242     High  
cufflinks 3.941       Low
cufflinks 7.528     High High

0 Strain