Gene : Glyma.16G079100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31791:SF12 - FRIGIDA-LIKE PROTEIN 3 Genomic Order:  791
Name:  ? Glyma.16G079100 Secondary Identifier:  ? PAC:30558935
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G079100 0.5kb upstream 0.5kb upstream 6212 true Chr16: 8135056-8141267 Glycine max
Glyma.16G079100 0.5kb upstream 0.5kb upstream 500 false Chr16: 8140768-8141267 Glycine max
Glyma.16G079100 0.5kb downstream 0.5kb downstream 6212 true Chr16: 8134556-8140767 Glycine max
Glyma.16G079100 0.5kb downstream 0.5kb downstream 500 false Chr16: 8134556-8135055 Glycine max
Glyma.16G079100 1.0kb upstream 1.0kb upstream 6712 true Chr16: 8135056-8141767 Glycine max
Glyma.16G079100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8140768-8141767 Glycine max
Glyma.16G079100 1.0kb downstream 1.0kb downstream 6712 true Chr16: 8134056-8140767 Glycine max
Glyma.16G079100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8134056-8135055 Glycine max
Glyma.16G079100 2.0kb upstream 2.0kb upstream 7712 true Chr16: 8135056-8142767 Glycine max
Glyma.16G079100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8140768-8142767 Glycine max
Glyma.16G079100 2.0kb downstream 2.0kb downstream 7712 true Chr16: 8133056-8140767 Glycine max
Glyma.16G079100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8133056-8135055 Glycine max
Glyma.16G079100 5.0kb upstream 5.0kb upstream 10712 true Chr16: 8135056-8145767 Glycine max
Glyma.16G079100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8140768-8145767 Glycine max
Glyma.16G079100 5.0kb downstream 5.0kb downstream 10712 true Chr16: 8130056-8140767 Glycine max
Glyma.16G079100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8130056-8135055 Glycine max
Glyma.16G079100 10.0kb upstream 10.0kb upstream 15712 true Chr16: 8135056-8150767 Glycine max
Glyma.16G079100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8140768-8150767 Glycine max
Glyma.16G079100 10.0kb downstream 10.0kb downstream 15712 true Chr16: 8125056-8140767 Glycine max
Glyma.16G079100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8125056-8135055 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313413 5265 Fabidae View MSA
124068381 5270 Rosid View MSA
123736427 5271 Pentapetalae View MSA
122790355 5272 Eudicot View MSA
122047978 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.6716 0.0 129.99 High  
cufflinks 52.3652 0.0 219.216 High High
cufflinks 31.2741 0.0 115.254 High  
cufflinks 29.5264 0.0 119.333 High  
cufflinks 19.1919 0.0 65.7508   Low
cufflinks 24.7734 0.0 88.0559 High  
cufflinks 58.5378 0.0 253.832 High High
cufflinks 28.7318 0.0 115.615 High  
cufflinks 29.6078 0.0 107.354 High  
cufflinks 3.474        
cufflinks 4.231        
cufflinks 3.897        
cufflinks 2.644       Low
cufflinks 2.206       Low
cufflinks 5.214     High  
cufflinks 4.499        
cufflinks 2.738       Low
cufflinks 4.509        
cufflinks 6.698       High
cufflinks 4.595        
cufflinks 4.203        
cufflinks 4.799        
cufflinks 5.138        
cufflinks 4.939        
cufflinks 4.165        
cufflinks 3.164        

0 Strain