Gene : Glyma.16G069000 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3038 - Histone acetyltransferase SAGA associated factor SGF29 Genomic Order:  690
Name:  ? Glyma.16G069000 Secondary Identifier:  ? PAC:30559767
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G069000 0.5kb upstream 0.5kb upstream 10888 true Chr16: 6867835-6878722 Glycine max
Glyma.16G069000 0.5kb upstream 0.5kb upstream 500 false Chr16: 6878223-6878722 Glycine max
Glyma.16G069000 0.5kb downstream 0.5kb downstream 10888 true Chr16: 6867335-6878222 Glycine max
Glyma.16G069000 0.5kb downstream 0.5kb downstream 500 false Chr16: 6867335-6867834 Glycine max
Glyma.16G069000 1.0kb upstream 1.0kb upstream 11388 true Chr16: 6867835-6879222 Glycine max
Glyma.16G069000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 6878223-6879222 Glycine max
Glyma.16G069000 1.0kb downstream 1.0kb downstream 11388 true Chr16: 6866835-6878222 Glycine max
Glyma.16G069000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 6866835-6867834 Glycine max
Glyma.16G069000 2.0kb upstream 2.0kb upstream 12388 true Chr16: 6867835-6880222 Glycine max
Glyma.16G069000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 6878223-6880222 Glycine max
Glyma.16G069000 2.0kb downstream 2.0kb downstream 12388 true Chr16: 6865835-6878222 Glycine max
Glyma.16G069000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 6865835-6867834 Glycine max
Glyma.16G069000 5.0kb upstream 5.0kb upstream 15388 true Chr16: 6867835-6883222 Glycine max
Glyma.16G069000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 6878223-6883222 Glycine max
Glyma.16G069000 5.0kb downstream 5.0kb downstream 15388 true Chr16: 6862835-6878222 Glycine max
Glyma.16G069000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 6862835-6867834 Glycine max
Glyma.16G069000 10.0kb upstream 10.0kb upstream 20388 true Chr16: 6867835-6888222 Glycine max
Glyma.16G069000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 6878223-6888222 Glycine max
Glyma.16G069000 10.0kb downstream 10.0kb downstream 20388 true Chr16: 6857835-6878222 Glycine max
Glyma.16G069000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 6857835-6867834 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306199 5265 Fabidae View MSA
124061243 5270 Rosid View MSA
123747151 5271 Pentapetalae View MSA
122789901 5272 Eudicot View MSA
122042873 5273 Angiosperm View MSA
121345271 5274 Embryophyte View MSA
123380184 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.13511 0.0 37.3711    
cufflinks 14.5518 0.0 71.5296   High
cufflinks 11.8874 0.0 60.5716    
cufflinks 12.8893 0.0 80.5268    
cufflinks 5.28439 0.0 31.7615   Low
cufflinks 10.9684 0.0 57.1483    
cufflinks 9.44133 0.0 61.7147    
cufflinks 12.8454 0.0 68.6216    
cufflinks 6.97621 0.0 33.686    
cufflinks 0.117        
cufflinks 0.067       Low
cufflinks 0.161        
cufflinks 0.085     Low  
cufflinks 0.076        
cufflinks 0.059       Low
cufflinks 0.153        
cufflinks 0.053     Low Low
cufflinks 0.171       High
cufflinks 0.149        
cufflinks 0.184       High
cufflinks 0.077        
cufflinks 0.178       High
cufflinks 0.126        
cufflinks 0.08        
cufflinks 0.17       High
cufflinks 0.072        

0 Strain