Gene : Glyma.16G069300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31079:SF2 - F4P13.14 PROTEIN-RELATED Genomic Order:  693
Name:  ? Glyma.16G069300 Secondary Identifier:  ? PAC:30558896
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G069300 0.5kb upstream 0.5kb upstream 6127 true Chr16: 6914405-6920531 Glycine max
Glyma.16G069300 0.5kb upstream 0.5kb upstream 500 false Chr16: 6914405-6914904 Glycine max
Glyma.16G069300 0.5kb downstream 0.5kb downstream 6127 true Chr16: 6914905-6921031 Glycine max
Glyma.16G069300 0.5kb downstream 0.5kb downstream 500 false Chr16: 6920532-6921031 Glycine max
Glyma.16G069300 1.0kb upstream 1.0kb upstream 6627 true Chr16: 6913905-6920531 Glycine max
Glyma.16G069300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 6913905-6914904 Glycine max
Glyma.16G069300 1.0kb downstream 1.0kb downstream 6627 true Chr16: 6914905-6921531 Glycine max
Glyma.16G069300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 6920532-6921531 Glycine max
Glyma.16G069300 2.0kb upstream 2.0kb upstream 7627 true Chr16: 6912905-6920531 Glycine max
Glyma.16G069300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 6912905-6914904 Glycine max
Glyma.16G069300 2.0kb downstream 2.0kb downstream 7627 true Chr16: 6914905-6922531 Glycine max
Glyma.16G069300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 6920532-6922531 Glycine max
Glyma.16G069300 5.0kb upstream 5.0kb upstream 10627 true Chr16: 6909905-6920531 Glycine max
Glyma.16G069300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 6909905-6914904 Glycine max
Glyma.16G069300 5.0kb downstream 5.0kb downstream 10627 true Chr16: 6914905-6925531 Glycine max
Glyma.16G069300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 6920532-6925531 Glycine max
Glyma.16G069300 10.0kb upstream 10.0kb upstream 15627 true Chr16: 6904905-6920531 Glycine max
Glyma.16G069300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 6904905-6914904 Glycine max
Glyma.16G069300 10.0kb downstream 10.0kb downstream 15627 true Chr16: 6914905-6930531 Glycine max
Glyma.16G069300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 6920532-6930531 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299139 5265 Fabidae View MSA
124050172 5270 Rosid View MSA
123744756 5271 Pentapetalae View MSA
122792957 5272 Eudicot View MSA
122048961 5273 Angiosperm View MSA
121311189 5274 Embryophyte View MSA
123348518 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.338231 0.0 1.71331   Low
cufflinks 2.4914 0.0 10.9652   High
cufflinks 0.283531 0.0 1.43192   Low
cufflinks 0.427728 0.0 2.77775    
cufflinks 0.816387 0.0 4.86072    
cufflinks 0.914743 0.0 4.0318    
cufflinks 0.551282 0.0 3.53844    
cufflinks 1.0128 0.0 5.88173    
cufflinks 1.33532 0.0 6.97906    
cufflinks 0.386       High
cufflinks 0.363       High
cufflinks 0.128        
cufflinks 0.43       High
cufflinks 0.335        
cufflinks 0.145        
cufflinks 0.075     Low Low
cufflinks 0.182        
cufflinks 0.093     Low  
cufflinks 0.531       High
cufflinks 0.079     Low Low
cufflinks 0.172        
cufflinks 0.071     Low Low
cufflinks 0.149        
cufflinks 0.1        
cufflinks 0.075     Low Low
cufflinks 0.389       High

0 Strain