Gene : Glyma.16G071200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24006:SF492 - F-BOX/LRR-REPEAT PROTEIN 5 Genomic Order:  712
Name:  ? Glyma.16G071200 Secondary Identifier:  ? PAC:30561812
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G071200 0.5kb upstream 0.5kb upstream 2270 true Chr16: 7144654-7146923 Glycine max
Glyma.16G071200 0.5kb upstream 0.5kb upstream 500 false Chr16: 7144654-7145153 Glycine max
Glyma.16G071200 0.5kb downstream 0.5kb downstream 2270 true Chr16: 7145154-7147423 Glycine max
Glyma.16G071200 0.5kb downstream 0.5kb downstream 500 false Chr16: 7146924-7147423 Glycine max
Glyma.16G071200 1.0kb upstream 1.0kb upstream 2770 true Chr16: 7144154-7146923 Glycine max
Glyma.16G071200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7144154-7145153 Glycine max
Glyma.16G071200 1.0kb downstream 1.0kb downstream 2770 true Chr16: 7145154-7147923 Glycine max
Glyma.16G071200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7146924-7147923 Glycine max
Glyma.16G071200 2.0kb upstream 2.0kb upstream 3770 true Chr16: 7143154-7146923 Glycine max
Glyma.16G071200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7143154-7145153 Glycine max
Glyma.16G071200 2.0kb downstream 2.0kb downstream 3770 true Chr16: 7145154-7148923 Glycine max
Glyma.16G071200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7146924-7148923 Glycine max
Glyma.16G071200 5.0kb upstream 5.0kb upstream 6770 true Chr16: 7140154-7146923 Glycine max
Glyma.16G071200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7140154-7145153 Glycine max
Glyma.16G071200 5.0kb downstream 5.0kb downstream 6770 true Chr16: 7145154-7151923 Glycine max
Glyma.16G071200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7146924-7151923 Glycine max
Glyma.16G071200 10.0kb upstream 10.0kb upstream 11770 true Chr16: 7135154-7146923 Glycine max
Glyma.16G071200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7135154-7145153 Glycine max
Glyma.16G071200 10.0kb downstream 10.0kb downstream 11770 true Chr16: 7145154-7156923 Glycine max
Glyma.16G071200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7146924-7156923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307349 5265 Fabidae View MSA
124066290 5270 Rosid View MSA
123750705 5271 Pentapetalae View MSA
122788712 5272 Eudicot View MSA
122042802 5273 Angiosperm View MSA
121310027 5274 Embryophyte View MSA
123347630 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.37259 0.0 7.69562    
cufflinks 2.21078 0.0 7.23874    
cufflinks 5.8372 0.0 16.7366   High
cufflinks 1.28997 0.0 4.49229   Low
cufflinks 3.3961 0.0 10.4474    
cufflinks 6.782 0.0 19.1044   High
cufflinks 1.817 0.0 6.09139    
cufflinks 1.86538 0.0 6.22746    
cufflinks 4.41717 0.0 13.0886    
cufflinks 0.648       Low
cufflinks 14.12     High High
cufflinks 3.074        
cufflinks 1.993        
cufflinks 1.063       Low
cufflinks 5.43     High  
cufflinks 2.408        
cufflinks 0.875       Low
cufflinks 1.148        
cufflinks 2.262        
cufflinks 2.234        
cufflinks 8.26     High High
cufflinks 2.257        
cufflinks 1.445        
cufflinks 11.408     High High
cufflinks 2.615        
cufflinks 3.166        

0 Strain