Gene : Glyma.16G059000 G. max Wm82.a2.v1
Defline:  (1 of 4) 5.1.3.1 - Ribulose-phosphate 3-epimerase / Xylulose phosphate 3-epimerase Genomic Order:  590
Name:  ? Glyma.16G059000 Secondary Identifier:  ? PAC:30561761
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CALVIN-PWY Glycine max pathologic  
Gmax NONOXIPENT-PWY Glycine max pathologic  
Gmax PENTOSE-P-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G059000 0.5kb upstream 0.5kb upstream 6431 true Chr16: 5772254-5778684 Glycine max
Glyma.16G059000 0.5kb upstream 0.5kb upstream 500 false Chr16: 5772254-5772753 Glycine max
Glyma.16G059000 0.5kb downstream 0.5kb downstream 6431 true Chr16: 5772754-5779184 Glycine max
Glyma.16G059000 0.5kb downstream 0.5kb downstream 500 false Chr16: 5778685-5779184 Glycine max
Glyma.16G059000 1.0kb upstream 1.0kb upstream 6931 true Chr16: 5771754-5778684 Glycine max
Glyma.16G059000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5771754-5772753 Glycine max
Glyma.16G059000 1.0kb downstream 1.0kb downstream 6931 true Chr16: 5772754-5779684 Glycine max
Glyma.16G059000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5778685-5779684 Glycine max
Glyma.16G059000 2.0kb upstream 2.0kb upstream 7931 true Chr16: 5770754-5778684 Glycine max
Glyma.16G059000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5770754-5772753 Glycine max
Glyma.16G059000 2.0kb downstream 2.0kb downstream 7931 true Chr16: 5772754-5780684 Glycine max
Glyma.16G059000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5778685-5780684 Glycine max
Glyma.16G059000 5.0kb upstream 5.0kb upstream 10931 true Chr16: 5767754-5778684 Glycine max
Glyma.16G059000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5767754-5772753 Glycine max
Glyma.16G059000 5.0kb downstream 5.0kb downstream 10931 true Chr16: 5772754-5783684 Glycine max
Glyma.16G059000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5778685-5783684 Glycine max
Glyma.16G059000 10.0kb upstream 10.0kb upstream 15931 true Chr16: 5762754-5778684 Glycine max
Glyma.16G059000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5762754-5772753 Glycine max
Glyma.16G059000 10.0kb downstream 10.0kb downstream 15931 true Chr16: 5772754-5788684 Glycine max
Glyma.16G059000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5778685-5788684 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302026 5265 Fabidae View MSA
124064705 5270 Rosid View MSA
123748809 5271 Pentapetalae View MSA
122786225 5272 Eudicot View MSA
122042554 5273 Angiosperm View MSA
121347255 5274 Embryophyte View MSA
123428302 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.52173 0.0 12.711   High
cufflinks 2.08794 0.0 8.36668   Low
cufflinks 3.32172 0.0 11.93   High
cufflinks 1.81999 0.0 7.78346   Low
cufflinks 2.91646 0.0 10.5572    
cufflinks 2.67393 0.0 10.0961    
cufflinks 2.81658 0.0 10.5398    
cufflinks 2.27343 0.0 9.01631    
cufflinks 3.05668 0.0 11.2326    
cufflinks 0.647        
cufflinks 0.446       Low
cufflinks 1.416        
cufflinks 0.888        
cufflinks 1.077        
cufflinks 0.551        
cufflinks 1.491        
cufflinks 0.547        
cufflinks 1.364        
cufflinks 1.152        
cufflinks 2.292       High
cufflinks 0.527       Low
cufflinks 1.95       High
cufflinks 1.222        
cufflinks 0.587        
cufflinks 2.418       High
cufflinks 0.406       Low

0 Strain