Gene : Glyma.16G062100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10266 - CYTOCHROME C1 Genomic Order:  621
Name:  ? Glyma.16G062100 Secondary Identifier:  ? PAC:30559514
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G062100 0.5kb upstream 0.5kb upstream 5158 true Chr16: 6056536-6061693 Glycine max
Glyma.16G062100 0.5kb upstream 0.5kb upstream 500 false Chr16: 6056536-6057035 Glycine max
Glyma.16G062100 0.5kb downstream 0.5kb downstream 5158 true Chr16: 6057036-6062193 Glycine max
Glyma.16G062100 0.5kb downstream 0.5kb downstream 500 false Chr16: 6061694-6062193 Glycine max
Glyma.16G062100 1.0kb upstream 1.0kb upstream 5658 true Chr16: 6056036-6061693 Glycine max
Glyma.16G062100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 6056036-6057035 Glycine max
Glyma.16G062100 1.0kb downstream 1.0kb downstream 5658 true Chr16: 6057036-6062693 Glycine max
Glyma.16G062100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 6061694-6062693 Glycine max
Glyma.16G062100 2.0kb upstream 2.0kb upstream 6658 true Chr16: 6055036-6061693 Glycine max
Glyma.16G062100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 6055036-6057035 Glycine max
Glyma.16G062100 2.0kb downstream 2.0kb downstream 6658 true Chr16: 6057036-6063693 Glycine max
Glyma.16G062100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 6061694-6063693 Glycine max
Glyma.16G062100 5.0kb upstream 5.0kb upstream 9658 true Chr16: 6052036-6061693 Glycine max
Glyma.16G062100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 6052036-6057035 Glycine max
Glyma.16G062100 5.0kb downstream 5.0kb downstream 9658 true Chr16: 6057036-6066693 Glycine max
Glyma.16G062100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 6061694-6066693 Glycine max
Glyma.16G062100 10.0kb upstream 10.0kb upstream 14658 true Chr16: 6047036-6061693 Glycine max
Glyma.16G062100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 6047036-6057035 Glycine max
Glyma.16G062100 10.0kb downstream 10.0kb downstream 14658 true Chr16: 6057036-6071693 Glycine max
Glyma.16G062100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 6061694-6071693 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305869 5265 Fabidae View MSA
124073211 5270 Rosid View MSA
123745446 5271 Pentapetalae View MSA
122788425 5272 Eudicot View MSA
122048813 5273 Angiosperm View MSA
121344559 5274 Embryophyte View MSA
123427665 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 91.056 0.0 421.073 High  
cufflinks 54.0049 0.0 217.713 High  
cufflinks 54.5745 0.0 226.404 High  
cufflinks 40.3782 0.0 155.766 High Low
cufflinks 69.7873 0.0 272.876 High  
cufflinks 113.652 0.0 564.129 High High
cufflinks 87.526 0.0 409.432 High  
cufflinks 48.791 0.0 193.993 High  
cufflinks 66.406 0.0 284.374 High  
cufflinks 3.213        
cufflinks 2.659        
cufflinks 2.637        
cufflinks 5.145       High
cufflinks 4.938       High
cufflinks 2.101       Low
cufflinks 2.811        
cufflinks 3.739        
cufflinks 3.072        
cufflinks 2.771        
cufflinks 2.536        
cufflinks 2.883        
cufflinks 2.728        
cufflinks 3.159        
cufflinks 2.99        
cufflinks 2.586        
cufflinks 2.742        

0 Strain