Gene : Glyma.16G096000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13325 - PROTEASE M50 MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE 2 PROTEASE Genomic Order:  960
Name:  ? Glyma.16G096000 Secondary Identifier:  ? PAC:30560528
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G096000 0.5kb upstream 0.5kb upstream 26503 true Chr16: 17694166-17720668 Glycine max
Glyma.16G096000 0.5kb upstream 0.5kb upstream 500 false Chr16: 17694166-17694665 Glycine max
Glyma.16G096000 0.5kb downstream 0.5kb downstream 26503 true Chr16: 17694666-17721168 Glycine max
Glyma.16G096000 0.5kb downstream 0.5kb downstream 500 false Chr16: 17720669-17721168 Glycine max
Glyma.16G096000 1.0kb upstream 1.0kb upstream 27003 true Chr16: 17693666-17720668 Glycine max
Glyma.16G096000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 17693666-17694665 Glycine max
Glyma.16G096000 1.0kb downstream 1.0kb downstream 27003 true Chr16: 17694666-17721668 Glycine max
Glyma.16G096000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 17720669-17721668 Glycine max
Glyma.16G096000 2.0kb upstream 2.0kb upstream 28003 true Chr16: 17692666-17720668 Glycine max
Glyma.16G096000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 17692666-17694665 Glycine max
Glyma.16G096000 2.0kb downstream 2.0kb downstream 28003 true Chr16: 17694666-17722668 Glycine max
Glyma.16G096000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 17720669-17722668 Glycine max
Glyma.16G096000 5.0kb upstream 5.0kb upstream 31003 true Chr16: 17689666-17720668 Glycine max
Glyma.16G096000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 17689666-17694665 Glycine max
Glyma.16G096000 5.0kb downstream 5.0kb downstream 31003 true Chr16: 17694666-17725668 Glycine max
Glyma.16G096000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 17720669-17725668 Glycine max
Glyma.16G096000 10.0kb upstream 10.0kb upstream 36003 true Chr16: 17684666-17720668 Glycine max
Glyma.16G096000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 17684666-17694665 Glycine max
Glyma.16G096000 10.0kb downstream 10.0kb downstream 36003 true Chr16: 17694666-17730668 Glycine max
Glyma.16G096000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 17720669-17730668 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300767 5265 Fabidae View MSA
124050342 5270 Rosid View MSA
123736480 5271 Pentapetalae View MSA
122789336 5272 Eudicot View MSA
122043269 5273 Angiosperm View MSA
121310098 5274 Embryophyte View MSA
123424527 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.15448 0.0 12.8814    
cufflinks 6.63759 0.0 23.1851   High
cufflinks 3.84759 0.0 12.0822    
cufflinks 6.72047 0.0 23.4084   High
cufflinks 4.97996 0.0 15.018    
cufflinks 2.03626 0.0 7.64767   Low
cufflinks 5.89549 0.0 21.3155    
cufflinks 3.82874 0.0 12.0615    
cufflinks 4.1805 0.0 12.8912    
cufflinks 0.344        
cufflinks 0.061       Low
cufflinks 0.38        
cufflinks 0.236        
cufflinks 0.355        
cufflinks 0.151        
cufflinks 0.442        
cufflinks 0.151        
cufflinks 0.658       High
cufflinks 0.475        
cufflinks 0.55        
cufflinks 0.104       Low
cufflinks 0.516        
cufflinks 0.398        
cufflinks 0.06       Low
cufflinks 0.49        
cufflinks 0.129        

0 Strain