Gene : Glyma.16G096200 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  962
Name:  ? Glyma.16G096200 Secondary Identifier:  ? PAC:30561736
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G096200 0.5kb upstream 0.5kb upstream 1016 true Chr16: 18245957-18246972 Glycine max
Glyma.16G096200 0.5kb upstream 0.5kb upstream 500 false Chr16: 18246473-18246972 Glycine max
Glyma.16G096200 0.5kb downstream 0.5kb downstream 1016 true Chr16: 18245457-18246472 Glycine max
Glyma.16G096200 0.5kb downstream 0.5kb downstream 500 false Chr16: 18245457-18245956 Glycine max
Glyma.16G096200 1.0kb upstream 1.0kb upstream 1516 true Chr16: 18245957-18247472 Glycine max
Glyma.16G096200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 18246473-18247472 Glycine max
Glyma.16G096200 1.0kb downstream 1.0kb downstream 1516 true Chr16: 18244957-18246472 Glycine max
Glyma.16G096200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 18244957-18245956 Glycine max
Glyma.16G096200 2.0kb upstream 2.0kb upstream 2516 true Chr16: 18245957-18248472 Glycine max
Glyma.16G096200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 18246473-18248472 Glycine max
Glyma.16G096200 2.0kb downstream 2.0kb downstream 2516 true Chr16: 18243957-18246472 Glycine max
Glyma.16G096200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 18243957-18245956 Glycine max
Glyma.16G096200 5.0kb upstream 5.0kb upstream 5516 true Chr16: 18245957-18251472 Glycine max
Glyma.16G096200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 18246473-18251472 Glycine max
Glyma.16G096200 5.0kb downstream 5.0kb downstream 5516 true Chr16: 18240957-18246472 Glycine max
Glyma.16G096200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 18240957-18245956 Glycine max
Glyma.16G096200 10.0kb upstream 10.0kb upstream 10516 true Chr16: 18245957-18256472 Glycine max
Glyma.16G096200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 18246473-18256472 Glycine max
Glyma.16G096200 10.0kb downstream 10.0kb downstream 10516 true Chr16: 18235957-18246472 Glycine max
Glyma.16G096200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 18235957-18245956 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250461 5265 Fabidae View MSA
124038744 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.163187 0.0 0.687773 Low  
cufflinks 0.136216 0.0 0.581792 Low  
cufflinks 0.472957 0.0 1.88067    
cufflinks 0.426532 0.0 1.70409    
cufflinks 1.19137E-5 0.0 0.00174537 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0659031 0.0 0.298219 Low  
cufflinks 4.46618E-5 0.0 0.0034054 Low Low
cufflinks 18.913     High  
cufflinks 1.474        
cufflinks 21.055     High  
cufflinks 8.445     High  
cufflinks 0.508       Low
cufflinks 0.04     Low Low
cufflinks 23.12     High  
cufflinks 0.853        
cufflinks 27.706     High  
cufflinks 21.093     High  
cufflinks 34.59     High  
cufflinks 1.554        
cufflinks 28.882     High  
cufflinks 23.495     High  
cufflinks 0.452       Low
cufflinks 28.381     High  
cufflinks 0.181       Low

0 Strain